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SCNpilot_expt_1000_bf_scaffold_7398_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7398_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..220
DNA (219bp) protein (73aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Carboxylate-amine ligase C380_22155 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYD6_9BURK
gamma-glutamyl:cysteine ligase
SCNpilot_expt_1000_bf_scaffold_7398_curated_2
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(261..659)
DNA (399bp) protein (133aa)
hypothetical protein; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-]
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI000237523F
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_7398_curated_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(641..874)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375240
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_7398_curated_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

987..1904
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375589
LysR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_7398_curated_5
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1967..2389)
DNA (423bp) protein (141aa)
NADP-dependent malic enzyme n=1 Tax=Burkholderia cenocepacia KC-01 RepID=V4ZZ56_9BURK
NADP-dependent malic enzyme {ECO:0000313|EMBL:ESS40313.1}; TaxID=1396830 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia KC-01.;"
SCNpilot_expt_1000_bf_scaffold_7398_curated_6
unknown

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comp(2390..2593)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7398_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2722..2937
DNA (216bp) protein (72aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Thiamine-monophosphate kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA25_9BURK
thiamine-monophosphate kinase
SCNpilot_expt_1000_bf_scaffold_7398_curated_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3057..3260
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI000237558B
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_7398_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3271..3822
DNA (552bp) protein (184aa)
RNA polymerase Sigma Factor n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFJ8_9BURK
RNA polymerase Sigma Factor
RNA polymerase Sigma Factor {ECO:0000313|EMBL:AFU48126.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_7398_curated_10
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3851..5167)
DNA (1317bp) protein (439aa)
reductase n=1 Tax=Acidovorax radicis RepID=UPI0002375590
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_7398_curated_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5418..5720)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003682296
Uncharacterized protein {ECO:0000313|EMBL:GAD22663.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_7398_curated_12
unknown

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comp(6124..6459)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7398_curated_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6875..7276)
DNA (402bp) protein (134aa)
UPI0003A51599 related cluster n=1 Tax=unknown RepID=UPI0003A51599
Uncharacterized protein {ECO:0000313|EMBL:GAD22661.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_1000_bf_scaffold_7398_curated_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8014..8967)
DNA (954bp) protein (318aa)
AraC family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037976C1
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:GAD22658.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_7398_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9186..10373)
DNA (1188bp) protein (396aa)
TwiN-arginine translocation pathway signal sequence domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYD8_9BURK
twiN-arginine translocation pathway signal sequence domain-containing protein
TwiN-arginine translocation pathway signal sequence domain-containing protein {ECO:0000313|EMBL:AFU48128.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_7398_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10391..10639)
DNA (249bp) protein (83aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA28_9BURK
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AFU48129.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 16 items

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