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SCNpilot_expt_1000_bf_scaffold_1886_curated

Search features with annotation key words

Displaying items 31-60 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1886_curated_31
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31752..33230)
DNA (1479bp) protein (493aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I021_9BURK
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
SCNpilot_expt_1000_bf_scaffold_1886_curated_32
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33221..34735)
DNA (1515bp) protein (505aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208};
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN90_9BURK
SCNpilot_expt_1000_bf_scaffold_1886_curated_33
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34735..36480)
DNA (1746bp) protein (582aa)
Peptidoglycan glycosyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUP2_9BURK
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AFU44467.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
peptidoglycan glycosyltransferase
SCNpilot_expt_1000_bf_scaffold_1886_curated_34
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36477..36815)
DNA (339bp) protein (113aa)
Cell division protein FtsL n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6C1_9BURK
cell division protein FtsL
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_35
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36817..37707)
DNA (891bp) protein (297aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXD6_9BURK
16S rRNA m(4)C1402 methyltransferase
SCNpilot_expt_1000_bf_scaffold_1886_curated_36
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37716..38213)
DNA (498bp) protein (166aa)
Protein MraZ n=1 Tax=Acidovorax sp. KKS102 RepID=K0I016_9BURK
cell division protein MraZ
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_1886_curated_37
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38397..39722)
DNA (1326bp) protein (442aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN83_9BURK
hslU; ATP-dependent protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_38
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39855..40394)
DNA (540bp) protein (180aa)
ATP-dependent protease subunit HslV (EC:3.4.25.1)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
ATP-dependent protease subunit HslV n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUN7_9BURK
SCNpilot_expt_1000_bf_scaffold_1886_curated_39
unknown

Not on your lists

40730..40978
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1886_curated_40
unknown

Not on your lists

41207..41842
DNA (636bp) protein (212aa)
id=12551191 bin=BDI tax=BDI organism_group=Betaproteobacteria
SCNpilot_expt_1000_bf_scaffold_1886_curated_41
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42336..43133)
DNA (798bp) protein (266aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXC9_9BURK
TraR/DksA family transcriptional regulator
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_42
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43325..44461)
DNA (1137bp) protein (379aa)
Cobalamin synthesis protein P47K n=1 Tax=Acidovorax sp. KKS102 RepID=K0I011_9BURK
cobalamin synthesis protein P47K
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_1886_curated_43
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44510..45745)
DNA (1236bp) protein (412aa)
Sam-dependent methyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN75_9BURK
sam-dependent methyltransferase
Sam-dependent methyltransferase {ECO:0000313|EMBL:AFU44458.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_44
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45960..46445)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI0001632467
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA49703.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_45
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46535..48190
DNA (1656bp) protein (552aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6B0_9BURK
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFU44456.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_46
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48230..48910)
DNA (681bp) protein (227aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Signal peptidase I n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXB9_9BURK
signal peptidase I
SCNpilot_expt_1000_bf_scaffold_1886_curated_47
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49030..50007)
DNA (978bp) protein (326aa)
Tyrosine recombinase XerC n=1 Tax=Acidovorax sp. KKS102 RepID=K0I006_9BURK
phage integrase family protein
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_48
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50059..50748)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN70_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44453.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_49
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50745..50870)
DNA (126bp) protein (42aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Diaminopimelate epimerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUM9_9BURK
SCNpilot_expt_1000_bf_scaffold_1886_curated_50
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52008..52400
DNA (393bp) protein (131aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6A5_9BURK
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:AFU44451.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_51
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52514..52711
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXB1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44450.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_52
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52737..53621)
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I000_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU44449.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_53
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53745..54509
DNA (765bp) protein (255aa)
Major facilitator superfamily protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN65_9BURK
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AFU44448.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_54
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54579..54947
DNA (369bp) protein (123aa)
Major facilitator superfamily protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN65_9BURK
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AFU44448.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_55
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55054..56751
DNA (1698bp) protein (566aa)
Beta-lactamase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUM7_9BURK
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AFU44447.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
beta-lactamase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1886_curated_56
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56786..57580
DNA (795bp) protein (265aa)
RNA-binding s4 domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I699_9BURK
RNA-binding s4 domain-containing protein
RNA-binding s4 domain-containing protein {ECO:0000313|EMBL:AFU44446.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_57
unknown

Not on your lists

comp(57679..57921)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1886_curated_58
unknown

Not on your lists

comp(58060..58155)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1886_curated_59
unknown

Not on your lists

comp(58279..58587)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1886_curated_60
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58718..59011
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXA3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44445.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 31-60 of 61 in total

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