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SCNpilot_expt_1000_bf_scaffold_1886_curated

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1886_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1243
DNA (1242bp) protein (414aa)
threonine dehydratase (EC:4.3.1.19)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Threonine dehydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUS0_9BURK
SCNpilot_expt_1000_bf_scaffold_1886_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1324..2130
DNA (807bp) protein (269aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Cobalamin synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6F4_9BURK
cobalamin-5-phosphate synthase CobS
SCNpilot_expt_1000_bf_scaffold_1886_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2127..2729
DNA (603bp) protein (201aa)
Phosphoglycerate mutase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXI9_9BURK
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:AFU44495.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2750..3199)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I053_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44494.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3248..3712
DNA (465bp) protein (155aa)
General secretion pathway protein G n=1 Tax=Acidovorax sp. KKS102 RepID=K0HND4_9BURK
general secretion pathway protein G
General secretion pathway protein G {ECO:0000313|EMBL:AFU44493.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3741..4256
DNA (516bp) protein (172aa)
General secretion pathway protein H n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUR5_9BURK
general secretion pathway protein H
General secretion pathway protein H {ECO:0000313|EMBL:AFU44492.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4253..4627
DNA (375bp) protein (125aa)
General secretion pathway protein I n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6E7_9BURK
general secretion pathway protein I
General secretion pathway protein I {ECO:0000313|EMBL:AFU44491.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4627..5358
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXI0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44490.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5355..5750
DNA (396bp) protein (132aa)
Type II secretion system protein K n=1 Tax=Acidovorax sp. KKS102 RepID=K0I045_9BURK
general secretion pathway protein K
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5702..6433
DNA (732bp) protein (244aa)
Type II secretion system protein K n=1 Tax=Acidovorax sp. KKS102 RepID=K0I045_9BURK
general secretion pathway protein K
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_11
unknown

Not on your lists

comp(6460..7062)
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1886_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7944..8363
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUR0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44487.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8483..9184
DNA (702bp) protein (234aa)
Putative general secretory pathway N transmembrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6E4_9BURK
general secretory pathway N transmembrane protein
Putative general secretory pathway N transmembrane protein {ECO:0000313|EMBL:AFU44486.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9189..10247
DNA (1059bp) protein (353aa)
General secretion pathway protein D n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXH0_9BURK
general secretion pathway protein D
General secretion pathway protein D {ECO:0000313|EMBL:AFU44485.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10259..11473
DNA (1215bp) protein (405aa)
General secretion pathway protein D n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXH0_9BURK
general secretion pathway protein D
General secretion pathway protein D {ECO:0000313|EMBL:AFU44485.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11495..12883
DNA (1389bp) protein (463aa)
General secretory pathway protein E n=1 Tax=Acidovorax sp. KKS102 RepID=K0I039_9BURK
general secretory pathway protein E
General secretory pathway protein E {ECO:0000313|EMBL:AFU44484.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12950..14599)
DNA (1650bp) protein (550aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0HNB7_9BURK
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFU44483.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14793..16697)
DNA (1905bp) protein (635aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phosphomethylpyrimidine synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUQ7_9BURK
phosphomethylpyrimidine synthase ThiC
SCNpilot_expt_1000_bf_scaffold_1886_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16989..17165)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6D9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44481.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_20
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17178..17699)
DNA (522bp) protein (174aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXG1_9BURK
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1886_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18302..20083
DNA (1782bp) protein (594aa)
Cache sensor-containing methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0I032_9BURK
Cache sensor-containing methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFU44479.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Cache sensor-containing methyl-accepting chemotaxis sensory transducer
SCNpilot_expt_1000_bf_scaffold_1886_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20227..21468)
DNA (1242bp) protein (414aa)
Cell division protein FtsZ n=1 Tax=Acidovorax sp. KKS102 RepID=K0HNA7_9BURK
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21620..22849)
DNA (1230bp) protein (410aa)
Cell division protein ftsA n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUQ1_9BURK
cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22957..23760)
DNA (804bp) protein (268aa)
Cell division protein FtsQ n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6D3_9BURK
polypeptide-transport-associated domain-containing protein
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23760..24749)
DNA (990bp) protein (330aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
D-alanine--D-alanine ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXF2_9BURK
SCNpilot_expt_1000_bf_scaffold_1886_curated_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24746..26179)
DNA (1434bp) protein (478aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I027_9BURK
SCNpilot_expt_1000_bf_scaffold_1886_curated_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26176..27243)
DNA (1068bp) protein (356aa)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN99_9BURK
SCNpilot_expt_1000_bf_scaffold_1886_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27323..28591)
DNA (1269bp) protein (423aa)
Lipid II flippase FtsW n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUP7_9BURK
cell division protein FtsW
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1886_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28588..30486)
DNA (1899bp) protein (633aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6C7_9BURK
UDP-N-acetylmuramoylalanine--D-glutamate ligase
SCNpilot_expt_1000_bf_scaffold_1886_curated_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30534..31712)
DNA (1179bp) protein (393aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXE2_9BURK
Displaying items 1-30 of 61 in total

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