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SCNpilot_expt_1000_bf_scaffold_5994_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5994_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78..434)
DNA (357bp) protein (119aa)
Histidine triad (HIT) protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6R1_9BURK
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:AFU44611.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(507..1544)
DNA (1038bp) protein (346aa)
Patatin n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXV4_9BURK
patatin
Patatin {ECO:0000313|EMBL:AFU44610.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1537..1923)
DNA (387bp) protein (129aa)
Putative transmembrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0H1_9BURK
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AFU44609.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1920..2294)
DNA (375bp) protein (125aa)
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HNT4_9BURK
SCNpilot_expt_1000_bf_scaffold_5994_curated_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2315..2704)
DNA (390bp) protein (130aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYM2_9BURK
phosphoribosyl-AMP cyclohydrolase
SCNpilot_expt_1000_bf_scaffold_5994_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2838..3638)
DNA (801bp) protein (267aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6Q7_9BURK
SCNpilot_expt_1000_bf_scaffold_5994_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3762..4502)
DNA (741bp) protein (247aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXU9_9BURK
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
SCNpilot_expt_1000_bf_scaffold_5994_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4568..5173)
DNA (606bp) protein (202aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0G8_9BURK
SCNpilot_expt_1000_bf_scaffold_5994_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5291..5635)
DNA (345bp) protein (115aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYN1_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_5994_curated_10
unknown

Not on your lists

6196..7110
DNA (915bp) protein (305aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5994_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7038..7490)
DNA (453bp) protein (151aa)
PilT domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6Q4_9BURK
PilT domain-containing protein
PilT domain-containing protein {ECO:0000313|EMBL:AFU44601.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7505..7729)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXU7_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_5994_curated_13
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7784..9238)
DNA (1455bp) protein (485aa)
transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377F5D
GntR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_5994_curated_14
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9750..11132)
DNA (1383bp) protein (461aa)
hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HNS5_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_5994_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11153..11266)
DNA (114bp) protein (38aa)
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
ATP phosphoribosyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV11_9BURK
SCNpilot_expt_1000_bf_scaffold_5994_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11784..13058)
DNA (1275bp) protein (425aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6Q1_9BURK
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
SCNpilot_expt_1000_bf_scaffold_5994_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13154..13396)
DNA (243bp) protein (81aa)
BolA family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXU5_9BURK
BolA family protein
BolA family protein {ECO:0000313|EMBL:AFU44595.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13398..14153)
DNA (756bp) protein (252aa)
ABC transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0G2_9BURK
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14150..15088)
DNA (939bp) protein (313aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HNS1_9BURK
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AFU44593.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15495..16157)
DNA (663bp) protein (221aa)
Toluene tolerance family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6P7_9BURK
toluene tolerance family protein
Toluene tolerance family protein {ECO:0000313|EMBL:AFU44591.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16292..17089)
DNA (798bp) protein (266aa)
VacJ family lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXU1_9BURK
VacJ family lipoprotein
VacJ family lipoprotein {ECO:0000313|EMBL:AFU44590.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17086..17574)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0F9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44589.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17610..18392)
DNA (783bp) protein (261aa)
ABC transporter ATP-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HNR8_9BURK
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFU44588.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18389..19285)
DNA (897bp) protein (299aa)
ABC transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV04_9BURK
ABC transporter
ABC transporter {ECO:0000313|EMBL:AFU44587.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5994_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19491..20969)
DNA (1479bp) protein (493aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.13)
Glutamate synthase subunit beta {ECO:0000313|EMBL:AFU44586.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AFU44586.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glutamate synthase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6P4_9BURK
SCNpilot_expt_1000_bf_scaffold_5994_curated_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21018..24434)
DNA (3417bp) protein (1139aa)
Glutamate synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXT9_9BURK
Glutamate synthase {ECO:0000313|EMBL:AFU44585.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
glutamate synthase
Displaying 26 items

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