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SCNpilot_expt_1000_bf_scaffold_4123_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4123_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..710)
DNA (708bp) protein (236aa)
Major facilitator transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7I5_9BURK
major facilitator superfamily transporter
Major facilitator transporter {ECO:0000313|EMBL:AFU47189.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1199..2848
DNA (1650bp) protein (550aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWB4_9BURK
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:AFU47188.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2981..4018)
DNA (1038bp) protein (346aa)
LacI family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2G8_9BURK
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AFU47187.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4223..4708
DNA (486bp) protein (162aa)
Carbohydrate kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ID02_9BURK
carbohydrate kinase
Carbohydrate kinase {ECO:0000313|EMBL:AFU47186.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4705..5217
DNA (513bp) protein (171aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3R7_9BURK
tripartite ATP-independent periplasmic transporter DctQ
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:AFU47185.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6362..6562
DNA (201bp) protein (67aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7H9_9BURK
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:AFU47184.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6618..7637
DNA (1020bp) protein (340aa)
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWB1_9BURK
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:AFU47183.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7796..8089)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2G4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47182.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8175..8465)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICZ7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47181.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9005..9442
DNA (438bp) protein (146aa)
Signal-transduction protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3R2_9BURK
signal-transduction protein
Signal-transduction protein {ECO:0000313|EMBL:AFU47180.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9647..10483)
DNA (837bp) protein (279aa)
Nitrate ABC transporter ATPases C n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3X3_9BURK
nitrate ABC transporter ATPases C
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_4123_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10480..10836)
DNA (357bp) protein (119aa)
Nitrate ABC transporter inner membrane subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWA6_9BURK
nitrate ABC transporter inner membrane subunit
Nitrate ABC transporter inner membrane subunit {ECO:0000313|EMBL:AFU47178.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_13
unknown

Not on your lists

10931..11074
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4123_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11473..11985)
DNA (513bp) protein (171aa)
Twin-arginine translocation pathway signal protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2F9_9BURK
twin-arginine translocation pathway signal protein
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:AFU47177.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_15
unknown

Not on your lists

12193..12372
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4123_curated_16
unknown

Not on your lists

comp(12484..13182)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4123_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13233..13859)
DNA (627bp) protein (209aa)
Fis family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICZ0_9BURK
Fis family transcriptional regulator
Fis family transcriptional regulator {ECO:0000313|EMBL:AFU47176.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14116..15276
DNA (1161bp) protein (387aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3R0_9BURK
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFU47175.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15322..16362
DNA (1041bp) protein (347aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=358220 species="Bacteria; Proteobacteria; Betaprot
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7H0_9BURK
UGMP family protein
SCNpilot_expt_1000_bf_scaffold_4123_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16425..17876)
DNA (1452bp) protein (484aa)
Aldehyde dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWA3_9BURK
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:AFU47173.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17927..18637)
DNA (711bp) protein (237aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2F6_9BURK
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AFU47172.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_22
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18634..19017)
DNA (384bp) protein (128aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICY6_9BURK
ABC transporter-like protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_4123_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19037..19378)
DNA (342bp) protein (114aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICY6_9BURK
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AFU47171.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19371..20303)
DNA (933bp) protein (311aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3Q5_9BURK
branched-chain amino acid transport system permease LivM
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:AFU47170.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_25
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20300..21178)
DNA (879bp) protein (293aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Acidovorax sp. CF316 RepID=J1EE02_9BURK
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJE50571.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
High-affinity branched-chain amino acid transporter permease LivH
SCNpilot_expt_1000_bf_scaffold_4123_curated_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21183..22391)
DNA (1209bp) protein (403aa)
Putative branched-chain amino acid binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWA0_9BURK
branched-chain amino acid ABC transporter substrate-binding protein
Putative branched-chain amino acid binding protein {ECO:0000313|EMBL:AFU47168.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_27
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22611..23606
DNA (996bp) protein (332aa)
Helix-turn-helix domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2F2_9BURK
helix-turn-helix domain-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_4123_curated_28
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23880..25262
DNA (1383bp) protein (461aa)
RND efflux system outer membrane lipoprotein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3W1_9BURK
RND efflux system outer membrane lipoprotein NodT
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_4123_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26078..26662
DNA (585bp) protein (195aa)
RND family efflux transporter MFP subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3Q3_9BURK
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AFU47165.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4123_curated_30
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26872..27420
DNA (549bp) protein (183aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7G1_9BURK
ABC transporter-like protein
Tax=GWA2_Burkholderiales_64_37_curated
Displaying items 1-30 of 34 in total

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