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SCNpilot_expt_1000_bf_scaffold_11932_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11932_curated_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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354..1745
DNA (1392bp) protein (464aa)
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA id=12551619 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EHL24688.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
SCNpilot_expt_1000_bf_scaffold_11932_curated_2
unknown

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comp(1774..1947)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11932_curated_3
unknown

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2264..2365
DNA (102bp) protein (34aa)
CzcA family heavy metal efflux pump n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSG7_9BURK
SCNpilot_expt_1000_bf_scaffold_11932_curated_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2662..2814
DNA (153bp) protein (51aa)
Integrase family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T311_ACIDE
Integrase family protein {ECO:0000313|EMBL:EER61159.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
phage integrase
SCNpilot_expt_1000_bf_scaffold_11932_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2886..3284
DNA (399bp) protein (133aa)
Integrase family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTF1_ALIDB
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADV00425.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_1000_bf_scaffold_11932_curated_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3465..3713)
DNA (249bp) protein (83aa)
XRE family transcriptional regulator id=12550914 bin=BDI species=Rubrivivax benzoatilyticus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KJA09020.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_11932_curated_7
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3842..4090
DNA (249bp) protein (83aa)
hypothetical protein id=12550915 bin=BDI species=Rubrivivax benzoatilyticus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KJA09021.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_11932_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4688..5539
DNA (852bp) protein (284aa)
integrase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E99C9
Integrase {ECO:0000313|EMBL:GAD22537.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
phage integrase; K14059 integrase
SCNpilot_expt_1000_bf_scaffold_11932_curated_9
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6005..6286
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVU1_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL23518.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
SCNpilot_expt_1000_bf_scaffold_11932_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6327..6689
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVT9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:GAO25259.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_1000_bf_scaffold_11932_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6739..7554)
DNA (816bp) protein (272aa)
IstB domain protein ATP-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5U5_ALIDK
IstB domain-containing protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:AEB85352.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_1000_bf_scaffold_11932_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7547..9073)
DNA (1527bp) protein (509aa)
Integrase catalytic subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5U4_ALIDK
integrase catalytic subunit
Integrase catalytic subunit {ECO:0000313|EMBL:AEB85351.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 12 items

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