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SCNpilot_expt_1000_bf_scaffold_3643_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3643_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..477
DNA (477bp) protein (159aa)
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I660_9BURK
SCNpilot_expt_1000_bf_scaffold_3643_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

631..1095
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1K1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46190.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3643_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1162..2130
DNA (969bp) protein (323aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAH3_9BURK
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:AFU46191.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3643_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2196..3497)
DNA (1302bp) protein (434aa)
glutamate carboxypeptidase (EC:3.4.17.11)
Glutamate carboxypeptidase {ECO:0000313|EMBL:AFU46192.1}; EC=3.4.17.11 {ECO:0000313|EMBL:AFU46192.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glutamate carboxypeptidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZB0_9BURK
SCNpilot_expt_1000_bf_scaffold_3643_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3609..4475)
DNA (867bp) protein (289aa)
Hth-type (Hthlysr) transcriptional activator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTA5_9BURK
hth-type (hthlysr) transcriptional activator
Hth-type (Hthlysr) transcriptional activator {ECO:0000313|EMBL:AFU46193.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3643_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4573..4980
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4U5_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46194.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3643_curated_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4982..5908)
DNA (927bp) protein (309aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375B8D
LysR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_3643_curated_8
unknown

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comp(6478..6741)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3643_curated_9
unknown

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comp(6835..7413)
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3643_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7755..8399
DNA (645bp) protein (215aa)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAH7_9BURK
SCNpilot_expt_1000_bf_scaffold_3643_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8413..9378)
DNA (966bp) protein (322aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
2-dehydropantoate 2-reductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZB6_9BURK
2-dehydropantoate 2-reductase
SCNpilot_expt_1000_bf_scaffold_3643_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9709..10242
DNA (534bp) protein (178aa)
MarR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTA9_9BURK
marR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AFU46198.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3643_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10724..11764
DNA (1041bp) protein (347aa)
RND efflux system outer membrane lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4V3_9BURK
RND efflux system outer membrane lipoprotein
RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:AFU46199.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3643_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11832..13166
DNA (1335bp) protein (445aa)
Secretion protein HlyD family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1K6_9BURK
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AFU46200.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3643_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13183..14826
DNA (1644bp) protein (548aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAH9_9BURK
EmrB/QacA subfamily drug resistance transporter
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:AFU46201.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3643_curated_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15089..15247
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KDF9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE51700.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
Displaying 16 items

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