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SCNpilot_expt_1000_bf_scaffold_3626_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3626_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1575)
DNA (1575bp) protein (525aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
CTP synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWM1_9BURK
SCNpilot_expt_1000_bf_scaffold_3626_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1710..3014)
DNA (1305bp) protein (435aa)
RNA-directed DNA polymerase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X1F8_COMTE
reverse transcriptase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_3626_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4522..5745
DNA (1224bp) protein (408aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQH7_9BURK
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AFU45298.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5770..6264
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I256_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45299.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6261..6707
DNA (447bp) protein (149aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZM9_9BURK
SCNpilot_expt_1000_bf_scaffold_3626_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6922..7422
DNA (501bp) protein (167aa)
17 kDa surface antigen n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8F2_9BURK
17 kDa surface antigen
17 kDa surface antigen {ECO:0000313|EMBL:AFU45301.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7504..8049)
DNA (546bp) protein (182aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWM6_9BURK
fkbp-type peptidyl-prolyl cis-trans isomerase
SCNpilot_expt_1000_bf_scaffold_3626_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8104..9234
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQI1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45303.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9393..9641
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I259_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45304.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10298..11080)
DNA (783bp) protein (261aa)
Beta-lactamase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8F4_9BURK
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AFU45306.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11191..12288)
DNA (1098bp) protein (366aa)
NlpB/DapX family lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWN1_9BURK
NlpB/DapX family lipoprotein
NlpB/DapX family lipoprotein {ECO:0000313|EMBL:AFU45307.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12336..13232)
DNA (897bp) protein (299aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQI4_9BURK
SCNpilot_expt_1000_bf_scaffold_3626_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13263..13817)
DNA (555bp) protein (185aa)
Type 12 methyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I261_9BURK
type 12 methyltransferase
Type 12 methyltransferase {ECO:0000313|EMBL:AFU45309.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_14
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13908..14063)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377875
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_3626_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14085..15677)
DNA (1593bp) protein (531aa)
Major facilitator superfamily protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZN5_9BURK
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AFU45310.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16045..17409
DNA (1365bp) protein (455aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
DNA topoisomerase 4 subunit B n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8F7_9BURK
DNA topoisomerase IV subunit B
SCNpilot_expt_1000_bf_scaffold_3626_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17443..18297
DNA (855bp) protein (285aa)
Lytic transglycosylase subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWN6_9BURK
lytic transglycosylase subunit
Lytic transglycosylase subunit {ECO:0000313|EMBL:AFU45312.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18294..20651
DNA (2358bp) protein (786aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
DNA topoisomerase IV subunit A (EC:5.99.1.-)
DNA topoisomerase 4 subunit A n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQI9_9BURK
SCNpilot_expt_1000_bf_scaffold_3626_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20909..22711
DNA (1803bp) protein (601aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0I265_9BURK
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFU45314.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
methyl-accepting chemotaxis sensory transducer
SCNpilot_expt_1000_bf_scaffold_3626_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22850..23308)
DNA (459bp) protein (153aa)
Endoribonuclease l-psp n=2 Tax=Acidovorax RepID=K0HWP1_9BURK
endoribonuclease l-psp
Endoribonuclease l-psp {ECO:0000313|EMBL:AFU45317.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23855..26017
DNA (2163bp) protein (721aa)
DNA internalization-like competence protein ComEC/Rec2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQJ5_9BURK
DNA internalization-like competence protein ComEC/Rec2 {ECO:0000313|EMBL:AFU45318.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
DNA internalization-like competence protein ComEC/Rec2
SCNpilot_expt_1000_bf_scaffold_3626_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26104..27618
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I269_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45319.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27620..27766
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZP0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45320.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27760..28719
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8G2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45321.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3626_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28761..29042)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWP5_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45322.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 25 items

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