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SCNpilot_expt_1000_bf_scaffold_2312_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2312_curated_1
unknown

Not on your lists

comp(84..314)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2312_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(697..1371)
DNA (675bp) protein (225aa)
Had-superfamily hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEH5_9BURK
had-superfamily hydrolase
Had-superfamily hydrolase {ECO:0000313|EMBL:AFU47811.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1401..2543)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXN8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47813.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2698..3177
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I935_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47814.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3223..3591
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5F6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47815.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3742..4878
DNA (1137bp) protein (379aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEH9_9BURK
peptidoglycan-binding domain-containing protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:AFU47816.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5008..6084)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3V0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47817.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6266..6916
DNA (651bp) protein (217aa)
Two component LuxR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXP0_9BURK
two component LuxR family transcriptional regulator
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:AFU47818.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_9
unknown

Not on your lists

comp(7122..7523)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2312_curated_10
unknown

Not on your lists

comp(8142..8807)
DNA (666bp) protein (222aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2312_curated_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9067..9471
DNA (405bp) protein (135aa)
signal transduction histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI0002376A89
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_2312_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9615..10802
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5G3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47820.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11026..12156)
DNA (1131bp) protein (377aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEI2_9BURK
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AFU47821.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12197..12865)
DNA (669bp) protein (223aa)
Short chain dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3V5_9BURK
short chain dehydrogenase
Short chain dehydrogenase {ECO:0000313|EMBL:AFU47822.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12950..14029)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXP3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47823.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14079..15266)
DNA (1188bp) protein (396aa)
Acetyl-CoA acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I947_9BURK
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFU47824.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15333..17138)
DNA (1806bp) protein (602aa)
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256|HAMAP-Rule:MF_00747};; EC=2.7.11.5 {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063055};; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063053};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase (EC:3.1.3.-)
Isocitrate dehydrogenase kinase/phosphatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5H2_9BURK
SCNpilot_expt_1000_bf_scaffold_2312_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17192..17851)
DNA (660bp) protein (220aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Carbonic anhydrase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEI5_9BURK
carbonate dehydratase
SCNpilot_expt_1000_bf_scaffold_2312_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17889..19079)
DNA (1191bp) protein (397aa)
Isovaleryl-CoA dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3V9_9BURK
isovaleryl-CoA dehydrogenase
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AFU47827.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19121..19582)
DNA (462bp) protein (154aa)
Phenylacetic acid degradation-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXP8_9BURK
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-like protein {ECO:0000313|EMBL:AFU47828.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19625..20020)
DNA (396bp) protein (132aa)
MerR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I952_9BURK
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AFU47829.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2312_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20146..21225
DNA (1080bp) protein (360aa)
Beta-lactamase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5H5_9BURK
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AFU47830.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 22 items

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