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SCNpilot_expt_1000_bf_scaffold_5818_curated

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5818_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..470)
DNA (468bp) protein (156aa)
Bifunctional haloalkane dehalogenase/tRNA-specific adenosine deaminase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXS4_9BURK
bifunctional haloalkane dehalogenase/tRNA-specific adenosine deaminase
Bifunctional haloalkane dehalogenase/tRNA-specific adenosine deaminase {ECO:0000313|EMBL:AFU45712.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_2
unknown

Not on your lists

538..1344
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7D8E4_9PSED
SCNpilot_expt_1000_bf_scaffold_5818_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1372..1623)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9I9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45711.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1746..2900)
DNA (1155bp) protein (385aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0G3_9BURK
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFU45710.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3400..5103
DNA (1704bp) protein (568aa)
Peptidase U32 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3B7_9BURK
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:AFU45709.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_6
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5111..5989)
DNA (879bp) protein (293aa)
non-ribosomal peptide synthetase, partial n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AB3F8
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
SCNpilot_expt_1000_bf_scaffold_5818_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6896..7900
DNA (1005bp) protein (335aa)
E1-E2 type ATPase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HRW5_9BURK
E1-E2 type ATPase
E1-E2 type ATPase {ECO:0000313|EMBL:AFU45708.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8071..9354
DNA (1284bp) protein (428aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXR8_9BURK
O-acetylhomoserine/O-acetylserine sulfhydrylase
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:AFU45707.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9558..10763)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9I6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45706.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10776..11693)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0G1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45705.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11941..12189)
DNA (249bp) protein (83aa)
OmpW family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3B4_9BURK
OmpW family protein
OmpW family protein {ECO:0000313|EMBL:AFU45704.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12174..12545)
DNA (372bp) protein (124aa)
OmpW family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3B4_9BURK
OmpW family protein
OmpW family protein {ECO:0000313|EMBL:AFU45704.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12675..13661)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HRW1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45703.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13841..14764)
DNA (924bp) protein (308aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXR4_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU45702.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14919..15902
DNA (984bp) protein (328aa)
Oxidoreductase FAD-binding subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9I0_9BURK
oxidoreductase FAD-binding subunit
Oxidoreductase FAD-binding subunit {ECO:0000313|EMBL:AFU45701.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16766..17197
DNA (432bp) protein (144aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0F8_9BURK
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AFU45700.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17441..17662
DNA (222bp) protein (74aa)
Aromatic-ring-hydroxylating dioxygenase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3B1_9BURK
aromatic-ring-hydroxylating dioxygenase subunit beta
Aromatic-ring-hydroxylating dioxygenase subunit beta {ECO:0000313|EMBL:AFU45699.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17669..17983
DNA (315bp) protein (105aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HRV6_9BURK
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AFU45698.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18081..18443)
DNA (363bp) protein (121aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXR0_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_5818_curated_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19548..20018
DNA (471bp) protein (157aa)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_5818_curated_21
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20112..20438
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS60425.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_22
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20598..20870
DNA (273bp) protein (91aa)
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_expt_1000_bf_scaffold_5818_curated_23
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20979..21212
DNA (234bp) protein (78aa)
id=12553216 bin=BDI tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EXI73019.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21275..22252
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W879_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42454.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22249..23064
DNA (816bp) protein (272aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Methionine aminopeptidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9H2_9BURK
methionine aminopeptidase
SCNpilot_expt_1000_bf_scaffold_5818_curated_26
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23628..23957
DNA (330bp) protein (110aa)
PII uridylyl-transferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVN4_9BURK
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_27
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24003..24182
DNA (180bp) protein (60aa)
PII uridylyl-transferase (EC:2.7.7.59)
PII uridylyl-transferase n=1 Tax=Acidovorax radicis RepID=UPI0002375180
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_5818_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24172..25746
DNA (1575bp) protein (525aa)
PII uridylyl-transferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0F5_9BURK
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5818_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25781..26320)
DNA (540bp) protein (180aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Peptide deformylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3A7_9BURK
peptide deformylase
SCNpilot_expt_1000_bf_scaffold_5818_curated_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26837..27592
DNA (756bp) protein (252aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9C4_9BURK
Displaying items 1-30 of 33 in total

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