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SCNpilot_expt_1000_bf_scaffold_8428_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8428_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..154)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVR9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU43935.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(594..767)
DNA (174bp) protein (58aa)
AraC family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4T7_9BURK
araC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AFU43936.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_3
Arctogadus glacialis, Arctogadus, Gadiformes, Neopterygii, Chordata, Metazoa

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947..1672
DNA (726bp) protein (242aa)
Antifreeze glycoprotein n=1 Tax=Arctogadus glacialis RepID=H2KMI7_ARCGL
Antifreeze glycoprotein {ECO:0000313|EMBL:AAQ09569.1}; TaxID=185735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Arctogadus.;" source="Arctogadus glacialis (Arctic cod).;"
OmpA/MotB domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8428_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1682..2518
DNA (837bp) protein (279aa)
Hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTE4_9BURK
hydrolase
Hydrolase {ECO:0000313|EMBL:AFU43937.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2552..3493)
DNA (942bp) protein (314aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HLX8_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU43938.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3568..4023
DNA (456bp) protein (152aa)
Transmembrane pair domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY34_9BURK
transmembrane pair domain-containing protein
Transmembrane pair domain-containing protein {ECO:0000313|EMBL:AFU43939.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4128..4853
DNA (726bp) protein (242aa)
Putative lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVS2_9BURK
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AFU43940.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5003..6388
DNA (1386bp) protein (462aa)
Methionine synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4U4_9BURK
methionine synthase
Methionine synthase {ECO:0000313|EMBL:AFU43941.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6391..6855
DNA (465bp) protein (155aa)
Methionine synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4U4_9BURK
methionine synthase
Methionine synthase {ECO:0000313|EMBL:AFU43941.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6825..7736
DNA (912bp) protein (304aa)
Methionine synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4U4_9BURK
methionine synthase
Methionine synthase {ECO:0000313|EMBL:AFU43941.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7809..8210)
DNA (402bp) protein (134aa)
Translation initiation inhibitor n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTF0_9BURK
translation initiation inhibitor
Translation initiation inhibitor {ECO:0000313|EMBL:AFU43942.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_12
unknown

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comp(8563..8769)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8428_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8872..9303
DNA (432bp) protein (144aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HLY4_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU43943.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_14
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9406..9885)
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002376E03
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KFN43871.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
SCNpilot_expt_1000_bf_scaffold_8428_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10717..11088)
DNA (372bp) protein (124aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Shikimate kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVS8_9BURK
Displaying 15 items

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