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SCNpilot_expt_1000_bf_scaffold_4220_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4220_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..267
DNA (267bp) protein (89aa)
Diguanylate phosphodiesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1I6_9BURK
diguanylate phosphodiesterase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AFU46155.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4220_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

515..1252
DNA (738bp) protein (246aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AFU46154.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AFU46154.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
3-ketoacyl-ACP reductase n=1 Tax=Acidovorax radicis RepID=UPI0002375811
SCNpilot_expt_1000_bf_scaffold_4220_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1745..3784)
DNA (2040bp) protein (680aa)
ABC transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HT77_9BURK
ABC transporter {ECO:0000313|EMBL:AFU46153.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
ABC transporter
SCNpilot_expt_1000_bf_scaffold_4220_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3899..4828)
DNA (930bp) protein (310aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ70_9BURK
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:AFU46152.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4220_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4825..4974)
DNA (150bp) protein (50aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Succinyl-diaminopimelate desuccinylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAE9_9BURK
succinyl-diaminopimelate desuccinylase
SCNpilot_expt_1000_bf_scaffold_4220_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6178..7341)
DNA (1164bp) protein (388aa)
Twitching motility protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1I2_9BURK
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:AFU46150.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4220_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7410..8243)
DNA (834bp) protein (278aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4R5_9BURK
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
SCNpilot_expt_1000_bf_scaffold_4220_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8260..9465)
DNA (1206bp) protein (402aa)
Succinyldiaminopimelate transaminase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HT66_9BURK
succinyldiaminopimelate transaminase
Succinyldiaminopimelate transaminase {ECO:0000313|EMBL:AFU46148.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4220_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9647..11134
DNA (1488bp) protein (496aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ64_9BURK
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFU46147.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4220_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11193..11900)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAE5_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46146.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4220_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11897..12040)
DNA (144bp) protein (48aa)
Polyhydroxyalkanoate depolymerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1I0_9BURK
polyhydroxyalkanoate depolymerase
Polyhydroxyalkanoate depolymerase {ECO:0000313|EMBL:AFU46145.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4220_curated_12
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12205..13509
DNA (1305bp) protein (435aa)
id=12552115 bin=BDI tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EWS64123.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
SCNpilot_expt_1000_bf_scaffold_4220_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13678..14766)
DNA (1089bp) protein (363aa)
RelA/SpoT domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4R0_9BURK
RelA/SpoT domain-containing protein
RelA/SpoT domain-containing protein {ECO:0000313|EMBL:AFU46144.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4220_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14990..15154
DNA (165bp) protein (55aa)
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HT62_9BURK
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFU46143.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 14 items

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