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SCNpilot_expt_1000_bf_scaffold_5526_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5526_curated_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92..565)
DNA (474bp) protein (158aa)
Endoribonuclease L-PSP n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Y4_9BURK
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_5526_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(607..1698)
DNA (1092bp) protein (364aa)
Peptidase M48, Ste24p n=1 Tax=Acidovorax sp. KKS102 RepID=K0HP95_9BURK
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:AFU44823.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1718..2311)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVI1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44822.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2425..2847)
DNA (423bp) protein (141aa)
Globin n=1 Tax=Acidovorax sp. KKS102 RepID=K0I774_9BURK
globin
Globin {ECO:0000313|EMBL:AFU44821.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2974..3963)
DNA (990bp) protein (330aa)
Sulfate transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYC9_9BURK
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:AFU44820.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3960..5150)
DNA (1191bp) protein (397aa)
Sulfate transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYC9_9BURK
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:AFU44820.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5184..6068)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Y2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44819.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6191..6865
DNA (675bp) protein (225aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Pyrrolidone-carboxylate peptidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HP93_9BURK
pyroglutamyl-peptidase I
SCNpilot_expt_1000_bf_scaffold_5526_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6983..7972
DNA (990bp) protein (330aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase {ECO:0000313|EMBL:AFU44817.1}; EC=4.3.1.12 {ECO:0000313|EMBL:AFU44817.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ornithine cyclodeaminase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVH7_9BURK
SCNpilot_expt_1000_bf_scaffold_5526_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7969..9672
DNA (1704bp) protein (568aa)
Diguanylate cyclase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I770_9BURK
Diguanylate cyclase {ECO:0000313|EMBL:AFU44816.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
diguanylate cyclase
SCNpilot_expt_1000_bf_scaffold_5526_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9688..10101)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYC3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44815.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10250..10822)
DNA (573bp) protein (191aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0X7_9BURK
SCNpilot_expt_1000_bf_scaffold_5526_curated_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10903..12201)
DNA (1299bp) protein (433aa)
Guanine deaminase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVH1_9BURK
guanine deaminase
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_5526_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12314..12706)
DNA (393bp) protein (131aa)
Basic membrane lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I764_9BURK
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:AFU44811.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_15
unknown

Not on your lists

12774..12971
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5526_curated_16
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13579..15186)
DNA (1608bp) protein (536aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI00023769C9
putative methyl-accepting chemotaxis protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_5526_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15370..16422)
DNA (1053bp) protein (351aa)
adenosine deaminase (EC:3.5.4.4)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Adenosine deaminase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0X2_9BURK
SCNpilot_expt_1000_bf_scaffold_5526_curated_18
unknown

Not on your lists

16793..17362
DNA (570bp) protein (190aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5526_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17527..17952)
DNA (426bp) protein (142aa)
Basic membrane lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVG6_9BURK
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:AFU44807.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17895..18677)
DNA (783bp) protein (261aa)
Basic membrane lipoprotein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVG6_9BURK
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:AFU44807.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18787..19707)
DNA (921bp) protein (307aa)
ABC transporter permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0I762_9BURK
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AFU44806.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19707..20780)
DNA (1074bp) protein (358aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYB3_9BURK
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AFU44805.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20773..22359)
DNA (1587bp) protein (529aa)
Monosaccharide-transporting ATPase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0W8_9BURK
monosaccharide-transporting ATPase
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AFU44804.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22439..23311)
DNA (873bp) protein (291aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HP80_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU44803.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23512..24981
DNA (1470bp) protein (490aa)
Molybdopterin dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVG2_9BURK
molybdopterin dehydrogenase
Molybdopterin dehydrogenase {ECO:0000313|EMBL:AFU44802.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24978..27326
DNA (2349bp) protein (783aa)
Molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I756_9BURK
Molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase {ECO:0000313|EMBL:AFU44801.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase
SCNpilot_expt_1000_bf_scaffold_5526_curated_27
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27323..28132
DNA (810bp) protein (270aa)
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_5526_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28175..30301)
DNA (2127bp) protein (709aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYA8_9BURK
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:AFU44800.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
PAS/PAC sensor-containing diguanylate cyclase
SCNpilot_expt_1000_bf_scaffold_5526_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30656..31279)
DNA (624bp) protein (208aa)
CRP/FNR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0W2_9BURK
CRP/FNR family transcriptional regulator
CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:AFU44799.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5526_curated_30
unknown

Not on your lists

comp(31564..32088)
DNA (525bp) protein (175aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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