ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2543_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2543_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..316)
DNA (315bp) protein (105aa)
UvrABC system protein C n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUS7_9BURK
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(996..2057)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I647_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46719.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_3
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2054..3031)
DNA (978bp) protein (326aa)
LacI family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377BB9
LacI family transcriptional regulator {ECO:0000313|EMBL:KJA11278.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2543_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3077..4009)
DNA (933bp) protein (311aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I650_9BURK
hydroxymethylglutaryl-CoA lyase
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:AFU46724.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_5
unknown

Not on your lists

4550..4870
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2543_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5417..6319
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBN9_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU46726.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6316..7464
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I113_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46727.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7605..8159
DNA (555bp) protein (185aa)
Elongation factor P n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUT2_9BURK
elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8294..9685)
DNA (1392bp) protein (464aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=358220 species="Bacteria; Pro
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Acidovorax sp. KKS102 RepID=K0I653_9BURK
rimO; 30S ribosomal protein S12 methylthiotransferase
SCNpilot_expt_1000_bf_scaffold_2543_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9835..10395)
DNA (561bp) protein (187aa)
Polyhydroxyalkonate synthesis repressor, PhaR n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2T2_9BURK
polyhydroxyalkonate synthesis repressor PhaR
Polyhydroxyalkonate synthesis repressor, PhaR {ECO:0000313|EMBL:AFU46730.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10852..13065)
DNA (2214bp) protein (738aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBP4_9BURK
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:AFU46731.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
(p)ppGpp synthetase I SpoT/RelA
SCNpilot_expt_1000_bf_scaffold_2543_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13062..14030)
DNA (969bp) protein (323aa)
Alpha/beta hydrolase fold protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I115_9BURK
alpha/beta fold family hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AFU46732.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14146..14928
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:AFU46733.1}; EC=1.1.1.30 {ECO:0000313|EMBL:AFU46733.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
3-hydroxybutyrate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUT6_9BURK
SCNpilot_expt_1000_bf_scaffold_2543_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15036..15752)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I657_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46734.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15967..16698
DNA (732bp) protein (244aa)
Osmolarity response regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2T4_9BURK
ompR; osmolarity response regulator
Osmolarity response regulator {ECO:0000313|EMBL:AFU46735.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16705..18234
DNA (1530bp) protein (510aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBP7_9BURK
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_2543_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18297..19649)
DNA (1353bp) protein (451aa)
gudD; glucarate dehydratase (EC:4.2.1.40)
Glucarate dehydratase {ECO:0000313|EMBL:AFU46737.1}; EC=4.2.1.40 {ECO:0000313|EMBL:AFU46737.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glucarate dehydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I118_9BURK
SCNpilot_expt_1000_bf_scaffold_2543_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19700..20440)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUT9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46738.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2543_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20777..21055)
DNA (279bp) protein (93aa)
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I660_9BURK
Displaying 19 items

View Taxonomy