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SCNpilot_expt_1000_bf_scaffold_4803_curated_13

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: 11109..11675

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radc; K03630 DNA repair protein RadC id=5082453 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 172.0
  • Bit_score: 197
  • Evalue 1.30e-47
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 154.0
  • Bit_score: 179
  • Evalue 9.10e-43
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 189.0
  • Bit_score: 279
  • Evalue 2.90e-72

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGTCGACCACACCAATTGCTAAGCCCCCGAAGCGTCTCATGTCACTGGCGCGTTCCAGAGTTGGGGAGGCGATTCCCGCATACGGGGTTGCGGCTGGTTCTAACAGCGTTCGACAAGGGCTGCGACCACGAGAGCGGGCTGTTGTTGATCGTGCACTTGAAATCCTTGGACGGTATCTGCGGGGGCCTGGGGATGTCTTTGATAACCCGGAAGCCGTGAAGCAGTATTTGCGGTTGCATCTCGCGGCGGAGACCTGCGAACACTTTGCGGTGTTGTACCTGGACGCTCAAAACCGGGGCATCGCATTTGAGCGGCACTTCACTGGGACGCTGAAGCAGGCGACCGTGTACCCGCGAGAAATTGTTGCGGCCGTGTTGAGGCATGAGGCGGCGGCCGTAGTGCTTGCGCACAACCACCCTAGTGGAAACGTGCGTCCGAGCAGGGAGGACGAGGCGTTGACGGTCACCCTGAAACAGGCGCTCGCGCTTGTTGATGTGCGCGTCCTTGATCACGTCATCGTGGGCGGCGGGCAGGCTCTGAGCATGGCCGAGGAAGGGTTGATTTAG
PROTEIN sequence
Length: 189
MSTTPIAKPPKRLMSLARSRVGEAIPAYGVAAGSNSVRQGLRPRERAVVDRALEILGRYLRGPGDVFDNPEAVKQYLRLHLAAETCEHFAVLYLDAQNRGIAFERHFTGTLKQATVYPREIVAAVLRHEAAAVVLAHNHPSGNVRPSREDEALTVTLKQALALVDVRVLDHVIVGGGQALSMAEEGLI*