ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1534_curated_14

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: 12987..13859

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002376324 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 290.0
  • Bit_score: 552
  • Evalue 2.50e-154
binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 281.0
  • Bit_score: 513
  • Evalue 4.10e-143
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 291.0
  • Bit_score: 569
  • Evalue 3.70e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGAGCCTGGCCACCACCTTGCTGCACAAAAAGGCCGCGCCCTGGTGGCTGTCTGGCCCGGCGCTGCTGCTGTTCACGGTGCTGCTGCTGGTGCCGCTGGCACTCACGGCGGTGCTGTCGTTCAATGCCTTTGACCCGGCCACCGGGGTGAAGGCGGGCGAGTTCACGCTGGAGCATTACGCCCATGTATTCACCGATTCGTACTACCACGCCATCTTCTGGCGCACGTTCTGGATTGCTGGGCTGGTCACACTGATCTGCGTGCTGATTGGCGCGCCCGAGGCCTACATCCTGAGCCGTATGGGCAACCCCTGGCGCTCCATTCTGCTGCTGGTGGTGCTTGCGCCGCTGCTGGTGTCGGTGGTGGTGCGCGCCTTTGGCTGGAGCATGCTGCTGGGGCCGGAGGGGCTGGTCAACGGCCTGTTCGGGCTGATGGGTTTTGGGCCCGTGAAGATGCTCTACACCGAGATCGCAGTCGTCATCGCCCTGGTGCATGTGATGCTGCCTTTCATGGTGATCCCTGTGTGGACCTCGCTGCAGAAGCTGGACCCCGGTGTGGAAAACGCCGCGCTGTCGCTGCAGGCCAGCCCCTTCACCACGCTGCGGCGCATTGTGTTGCCGCAGGTGCTGCCGGGCATTTTGTCGGGCAGCCTGATCGTGTTTGGGCTGGCGGCCAGCTCGTTCGCCATTCCCGGCCTGCTGGGTGGGCGGCGGCTGAAGATGGTGGCCACGGTGGTGTACGACGAGTACCTGCACGAGCTGAACTGGCCCCTGGGCGCGGCGATTGCGCTGACGCTGTTGGTGGCCAACCTGGTGGTCATGCTGAGCTACAACCGCTTGGTTGAAGGCCGCTACAAGAAATCTTTGGGATAA
PROTEIN sequence
Length: 291
MSLATTLLHKKAAPWWLSGPALLLFTVLLLVPLALTAVLSFNAFDPATGVKAGEFTLEHYAHVFTDSYYHAIFWRTFWIAGLVTLICVLIGAPEAYILSRMGNPWRSILLLVVLAPLLVSVVVRAFGWSMLLGPEGLVNGLFGLMGFGPVKMLYTEIAVVIALVHVMLPFMVIPVWTSLQKLDPGVENAALSLQASPFTTLRRIVLPQVLPGILSGSLIVFGLAASSFAIPGLLGGRRLKMVATVVYDEYLHELNWPLGAAIALTLLVANLVVMLSYNRLVEGRYKKSLG*