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SCNpilot_expt_1000_bf_scaffold_3615_curated_18

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: comp(14670..15245)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2T8Y0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 164.0
  • Bit_score: 139
  • Evalue 3.40e-30
Transcriptional regulator {ECO:0000313|EMBL:EJL74522.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 164.0
  • Bit_score: 139
  • Evalue 4.70e-30
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 156.0
  • Bit_score: 130
  • Evalue 4.90e-28

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGCCAGATCAATGGTTTATCTAATCAAGTACTCTCGGGGTTTACGCGCAAGTGCAAGGAGGCGCCCGTGGATGGCTCGAAGGAGTTTTTTTTGTTCCGCTTGAACAGGCTGGCTGCCATGGCAGGCCAACCCCTGGTTCGGCTGTGCGAGGGGAAGTTCGGGATCACTCGACGGGAGTGGAGATTGATCGTTGTGCTGTCTCAAAGCGGTCCGTTGCTCTCCTCTGATCTGGCGACCCGCGCCATGGTCGAACCCGCGCGCACATCCAAGGCCGTCAGCCAATTGGTCGAGAAAGGACTGGCCTTGCGTGTACCTCGGCCGAATGACCGGCGCTGTGTGGAGATTCATCTGTCGGAGCGCGCAAAGGAGATATACGCAGAGCTCTACCCCGTCCTCAAAGACATCAACAACGCACTGCTGTCGACACTCCCAGATGCGGACCGCCAACACCTGGAGCGGATCTTCGTGGCTTTGGAGCACAAAGCCGCCGACTTGCTGGCGACCGGAGGCTTTCCCAAGATAGACCGTAGCAAACAGCGCGGGGAGCGCCCCGTCCCGCACCGCAGCTTTTAG
PROTEIN sequence
Length: 192
MSQINGLSNQVLSGFTRKCKEAPVDGSKEFFLFRLNRLAAMAGQPLVRLCEGKFGITRREWRLIVVLSQSGPLLSSDLATRAMVEPARTSKAVSQLVEKGLALRVPRPNDRRCVEIHLSERAKEIYAELYPVLKDINNALLSTLPDADRQHLERIFVALEHKAADLLATGGFPKIDRSKQRGERPVPHRSF*