ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3615_curated_21

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: 18466..18810

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B37F2A similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 110.0
  • Bit_score: 127
  • Evalue 1.00e-26
Uncharacterized protein {ECO:0000313|EMBL:AIJ21408.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 109.0
  • Bit_score: 118
  • Evalue 8.80e-24
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 104.0
  • Bit_score: 109
  • Evalue 5.40e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGAAGTGGCATGAAGAAGGCGAAGAGCCAGACTACCGTTTTTCGCTCGCGAACGAACGCACGTTTCTTGCGTGGAGCCGAACGGCCCTGGCACTGTTGGCGGGAGGAGTTGCGCTGCACCAATTCGCTTTTCATTTCCATCCGCAGTGGGCTTTTGACATGGCCGCTGCTTTGTTGGCGGTGCTGTCTGGTCTGCTGGGCGCGGGCGCGTATGTGCGCTGGAAAAGCAACGAGATCGCCATGCGCAATAAGCGTCCTCTGCCGCGGACTTGGCTTATGCCACTCCTGGCCGCCAGCGCCATCATCCTCTCTGTCTTTGCGATTTTCGTCTTCGGAATTCGATGA
PROTEIN sequence
Length: 115
MKWHEEGEEPDYRFSLANERTFLAWSRTALALLAGGVALHQFAFHFHPQWAFDMAAALLAVLSGLLGAGAYVRWKSNEIAMRNKRPLPRTWLMPLLAASAIILSVFAIFVFGIR*