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SCNpilot_expt_1000_bf_scaffold_2426_curated_22

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: 19801..20163

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 254
  • Evalue 6.30e-65
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5S9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 254
  • Evalue 4.50e-65
rumA; 23S rRNA m(5)U1939 methyltransferase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 254
  • Evalue 1.40e-65

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Taxonomy

Acidovorax sp. KKS102 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGAGCGCACCGAAAGAACTATCCCCCTCGTTTGAACCCACCGAGCAGAACGCTCAAGACAACCTGCCCGAAGGCTGGCTGCATGTGCAGTCCATGGACCTCGACGCCCAGGGCGTGGCCCGTAAGCCTGACGGCAAGGTGGTCTTCATCGATGGCGCCCTGCCATTTGAGCTGGTCACCGCCAACACCCACCGCAAAAAGAATAACTGGGAGCAGGCCAGCCTGGTGGCGATCCACCGCGAATCCTCCCAGCGCGTGCGGCCGGATTGTCCCCACTTTGGCCTGCACGCAGGCGCCTGCGGCGGCTGCAAGATGCAGCATTTGCACGTCGGCGCCCAGGTGGCCGTCAAGCAGCGGGTGCTG
PROTEIN sequence
Length: 121
MSAPKELSPSFEPTEQNAQDNLPEGWLHVQSMDLDAQGVARKPDGKVVFIDGALPFELVTANTHRKKNNWEQASLVAIHRESSQRVRPDCPHFGLHAGACGGCKMQHLHVGAQVAVKQRVL