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SCNpilot_expt_1000_bf_scaffold_2426_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2426_curated_1
unknown

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2..79
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2426_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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500..1042
DNA (543bp) protein (181aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;
tRNA pseudouridine synthase B n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUL7_9BURK
truB; tRNA pseudouridine synthase B
SCNpilot_expt_1000_bf_scaffold_2426_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1039..2865
DNA (1827bp) protein (609aa)
GTP-binding protein TypA n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0W0_9BURK
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:AFU46642.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2967..3842
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBH3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46641.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3839..4933
DNA (1095bp) protein (365aa)
3-hydroxyisobutyryl-CoA hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2M6_9BURK
3-hydroxyisobutyryl-CoA hydrolase
3-hydroxyisobutyryl-CoA hydrolase {ECO:0000313|EMBL:AFU46640.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5069..5977)
DNA (909bp) protein (303aa)
Putative transmembrane transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5Y1_9BURK
transmembrane transcriptional regulator
Putative transmembrane transcriptional regulator {ECO:0000313|EMBL:AFU46639.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6000..6551)
DNA (552bp) protein (184aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUL2_9BURK
ECF subfamily RNA polymerase sigma-24 subunit
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:AFU46638.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6586..6957)
DNA (372bp) protein (124aa)
Secreted repeat protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0V7_9BURK
hypothetical protein
Secreted repeat protein {ECO:0000313|EMBL:AFU46637.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7103..7576)
DNA (474bp) protein (158aa)
SsrA-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBG8_9BURK
smpB; ssrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7706..8146
DNA (441bp) protein (147aa)
Cyclase/dehydrase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2M3_9BURK
cyclase/dehydrase
Cyclase/dehydrase {ECO:0000313|EMBL:AFU46635.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8139..8486
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5X7_9BURK
hypothetical protein
UPF0125 protein C380_14675 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8538..9080)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUK8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46633.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9171..10661
DNA (1491bp) protein (497aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0V4_9BURK
inosine-5'-monophosphate dehydrogenase
SCNpilot_expt_1000_bf_scaffold_2426_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10742..11002
DNA (261bp) protein (87aa)
Prevent-host-death family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBG5_9BURK
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AFU46631.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10999..11433
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2M0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46630.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11446..13062
DNA (1617bp) protein (539aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5X3_9BURK
SCNpilot_expt_1000_bf_scaffold_2426_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13142..13810
DNA (669bp) protein (223aa)
Phosphoesterase HXTX n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5T2_9BURK
phosphoesterase HXTX
Phosphoesterase HXTX {ECO:0000313|EMBL:AFU46564.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13835..14905
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUG4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46563.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15006..18752)
DNA (3747bp) protein (1249aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0P8_9BURK
delta-1-pyrroline-5-carboxylate dehydrogenase
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AFU46562.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18880..19353
DNA (474bp) protein (158aa)
AsnC family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBB2_9BURK
asnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AFU46561.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19446..19742
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2I2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46560.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2426_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19801..20163
DNA (363bp) protein (121aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5S9_9BURK
rumA; 23S rRNA m(5)U1939 methyltransferase
Displaying 22 items

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