ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2099_curated_23

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: comp(22217..24169)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Acidovorax radicis RepID=UPI000237788D similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 645.0
  • Bit_score: 1020
  • Evalue 7.30e-295
vitamin b12 transporter BtuB; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 653.0
  • Bit_score: 554
  • Evalue 4.70e-155
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 653.0
  • Bit_score: 1033
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1953
ATGGCGGCAGCCCACGCGCAGTCCGACATCGCTGCCATGGCCGACCTGCCGCTGGAGCAACTCATGCAGATGCAGGTCACCACGGCCAGCCGCTATGAGCAGACAGCCTTGGAGGCCCCGGCGGCCGTGAGCGTAGTGACCGCCGATGACATCCAGCTGTTTGGCTACCGCACGCTGGCCGACGTGCTGGCCAGCATGCGCGGGCTGTATGTGTCGTACGACCGCAGCTACCACTACCTGGGCACACGGGGTTTTGCCACGCCAGGCGACTACAACACGCGGGTGCTGCTGCTGGTCAACGGTGTGCGCTTCAACGACAACGTCTATGACCAGGCAAGCATCGGCACGGACTTTCCCATCGACCTGGACCTGGTGGAACGGGTGGAGTTTGTGCCGGGCCCCGGGTCGGCGGTGTATGGGGCCAATGCTTTTTTTGGCGTGATCAACGTCATCACCCGCGACGGTCGCCAGCTGGGTAGGCCCCAGGTGAGCACCGAGGTCGGCAGCCATGGCTACGCCAAGCTGCGCTTCTCTGTCGGCGCTACGGATGCACAGGGAGGGGACTGGCTGATCGCAGCCACACGCTCCACCGCACGGGGTGCCGACCAGTACTACCCCGCGTTCGATGCGCCCGCCAGCCACCAGGGCGTGGCGCACGGCCTGGACTATGACCGCAGCACGCAGCTGTTCGCCCGCATGCGGCGCGATGGGCTGACGCTGACACTGGCCCACGGCGAGCGCACCAAGGGCATCCCGACCGCAGCGTTTTCGCAGGTTTTCAACGACCCACGCTCGCGGTACATCGACACCAGCACGCGCATGGCTGCCGAATACGCCGCGCAATGGCAGCCCACCCTGGCCTTCACTGCGCGCCTGCATGCAGGGCGCTACCAGTACGTGGGCGACTACGTGTACGACTACCCGCCCGTGACGGTGAACCGCGACGTCGGCACCGGCCAGTGGTGGGGCACAGAGTGGCAGTGGGTGAGCACGGCCCTCGCGCAGCACAAGCTGTCCTGGGGGCTGGACTACCGGCGCGATACCCGCATCGCACAGCGCAATGACGACCTGGACCCACCGGCGCAGTACCTCGATACACGCCGCAACGGCAATGTGCTGGGGGTCTATGTGCAGGATGAGTTTGCGCTGCGCCCCAACCTCACGCTGCACACCGGCCTGCGCTGGGGACAGCAGTCGGGCAGCGCGGGCGCCTTGCACCCCCGCTTGGGGCTGGTGTACTGGTGGGACGCTGCCACCGCCGTCAAGCTGCTGCACGGCACCGCCTACCGCCCGGCCAATGCCTACGAGCGCGACTACCGCGTGAACCTGCCCGGCGGTGTGGTGGATACCACCAACATCCGGTCCGAGCGTGTGCGCACCACCGAACTGGCCGTGGAGCATGCACCGACCGGGGCCACGCGCCTGCTGCTGACGGCGTTCCGGTCGGGGGTGAGCGACCTGATCTCGCTGGACAGCCTGGGCCACTCGGACCGCCTCACGTTCAACAACACCCGCACCGTCAAAGTGCATGGCCTGGAGGCCGAGGCCGAACAACGCTGGGCGGGCGGACGGCGCCTGCGAGTGGCCTACGGATGGCAAAAGGCGCGGGACCCGTCAACGGACGCAGCGCTGACCAACTCGCCCCGGCACCTGCTCAAGCTGCAATGGTCCGACGTGCTGCACGCGCCTGCGGGCTGGGGCTGGAACCCGGGCCGCTACGCCATCGAGGCCATCGGCATCGGCCCGCGCAACACTGTGCTCAACGCCCGCCTGCCCGGGCATGTACTGACCCACGTGACCTATTCCACGCGGATCGCGGACGTGGATGTATCGCTGGGGGTGTACAACTTGTTCAACCGCCGATATTCCGACCCCGCTTCGTTTGAGGTGCGGGAAGACGCGCTCCGGCAGGACGGGCGCACGTATCGCGTCAAGCTGACCTACGCGTTCTGA
PROTEIN sequence
Length: 651
MAAAHAQSDIAAMADLPLEQLMQMQVTTASRYEQTALEAPAAVSVVTADDIQLFGYRTLADVLASMRGLYVSYDRSYHYLGTRGFATPGDYNTRVLLLVNGVRFNDNVYDQASIGTDFPIDLDLVERVEFVPGPGSAVYGANAFFGVINVITRDGRQLGRPQVSTEVGSHGYAKLRFSVGATDAQGGDWLIAATRSTARGADQYYPAFDAPASHQGVAHGLDYDRSTQLFARMRRDGLTLTLAHGERTKGIPTAAFSQVFNDPRSRYIDTSTRMAAEYAAQWQPTLAFTARLHAGRYQYVGDYVYDYPPVTVNRDVGTGQWWGTEWQWVSTALAQHKLSWGLDYRRDTRIAQRNDDLDPPAQYLDTRRNGNVLGVYVQDEFALRPNLTLHTGLRWGQQSGSAGALHPRLGLVYWWDAATAVKLLHGTAYRPANAYERDYRVNLPGGVVDTTNIRSERVRTTELAVEHAPTGATRLLLTAFRSGVSDLISLDSLGHSDRLTFNNTRTVKVHGLEAEAEQRWAGGRRLRVAYGWQKARDPSTDAALTNSPRHLLKLQWSDVLHAPAGWGWNPGRYAIEAIGIGPRNTVLNARLPGHVLTHVTYSTRIADVDVSLGVYNLFNRRYSDPASFEVREDALRQDGRTYRVKLTYAF*