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SCNpilot_expt_1000_bf_scaffold_2099_curated

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2099_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..534
DNA (534bp) protein (178aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HT18_9BURK
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AFU43797.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

548..1366
DNA (819bp) protein (273aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4D4_9BURK
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AFU43796.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1363..3165
DNA (1803bp) protein (601aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVE2_9BURK
long-chain-fatty-acid--CoA ligase
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AFU43795.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3252..4085
DNA (834bp) protein (278aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXK6_9BURK
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AFU43794.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4250..5023
DNA (774bp) protein (258aa)
Pirin-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HT14_9BURK
pirin-like protein
Pirin-like protein {ECO:0000313|EMBL:AFU43792.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5063..5818
DNA (756bp) protein (252aa)
Chac family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4D1_9BURK
chac family protein
Chac family protein {ECO:0000313|EMBL:AFU43791.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_7
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6368..7075
DNA (708bp) protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP56805.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7223..7804
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXK1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU43789.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_9
unknown

Not on your lists

7964..8584
DNA (621bp) protein (207aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2099_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9117..14009)
DNA (4893bp) protein (1631aa)
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HLE0_9BURK
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFU43788.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_expt_1000_bf_scaffold_2099_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14320..14775
DNA (456bp) protein (152aa)
MerR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HT09_9BURK
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AFU43787.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14822..15313
DNA (492bp) protein (164aa)
Phenylacetic acid degradation-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4C8_9BURK
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-like protein {ECO:0000313|EMBL:AFU43786.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15331..16431)
DNA (1101bp) protein (367aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVD4_9BURK
SCNpilot_expt_1000_bf_scaffold_2099_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16605..17120)
DNA (516bp) protein (172aa)
Nlp/p60 protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSZ7_9BURK
nlp/p60 protein
Nlp/p60 protein {ECO:0000313|EMBL:AFU43777.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_15
unknown

Not on your lists

17320..17457
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2099_curated_16
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18007..18468
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Streptomyces sp. Wigar10 RepID=UPI000370AED5
Uncharacterized protein {ECO:0000313|EMBL:EWS62994.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_17
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18565..18762
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YH00_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRD14975.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19313..19753
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVC6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU43775.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19755..20471)
DNA (717bp) protein (239aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI000237788F
morA; diguanylate cyclase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_2099_curated_20
unknown

Not on your lists

21013..21333
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2099_curated_21
unknown

Not on your lists

21382..21522
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2099_curated_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21665..22213)
DNA (549bp) protein (183aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI000237788E
transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_2099_curated_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22217..24169)
DNA (1953bp) protein (651aa)
TonB-denpendent receptor n=1 Tax=Acidovorax radicis RepID=UPI000237788D
vitamin b12 transporter BtuB; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_2099_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24572..24988
DNA (417bp) protein (139aa)
DGPF domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXI4_9BURK
DGPF domain-containing protein
DGPF domain-containing protein {ECO:0000313|EMBL:AFU43774.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24988..25548
DNA (561bp) protein (187aa)
DoxX family domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HLC7_9BURK
DoxX family domain-containing protein
DoxX family domain-containing protein {ECO:0000313|EMBL:AFU43773.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25625..26032
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 13 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSZ1_9BURK
bleomycin resistance protein
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 13 {ECO:0000313|EMBL:AFU43772.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26039..27085
DNA (1047bp) protein (349aa)
RNA polymerase sigma factor sigma-70 family protein 6 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4B5_9BURK
RNA polymerase sigma factor sigma-70 family protein 6
RNA polymerase sigma factor sigma-70 family protein 6 {ECO:0000313|EMBL:AFU43771.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27037..27324
DNA (288bp) protein (96aa)
RNA polymerase sigma factor sigma-70 family protein 6 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4B5_9BURK
RNA polymerase sigma factor sigma-70 family protein 6
RNA polymerase sigma factor sigma-70 family protein 6 {ECO:0000313|EMBL:AFU43771.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27375..27902
DNA (528bp) protein (176aa)
Glutathione-dependent formaldehyde-activating protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVC1_9BURK
glutathione-dependent formaldehyde-activating protein
Glutathione-dependent formaldehyde-activating protein {ECO:0000313|EMBL:AFU43770.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2099_curated_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27924..28334)
DNA (411bp) protein (137aa)
Ribonuclease H n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXI1_9BURK
ribonuclease H
Ribonuclease H {ECO:0000313|EMBL:AFU43769.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 1-30 of 67 in total

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