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SCNpilot_cont_1000_bf_scaffold_86_curated

Search features with annotation key words

Displaying items 1-30 of 207 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_86_curated_1
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..2838)
DNA (2838bp) protein (946aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B461C2
hypothetical protein
Conserved repeat protein {ECO:0000313|EMBL:ACZ22388.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_2
Gordonia bronchialis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3312..4004)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) RepID=D0L8L5_GORB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY21032.1}; TaxID=526226 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC; 10667) (Rhodococcus bronchialis).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_3
unknown

Not on your lists

4141..4389
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_86_curated_4
unknown

Not on your lists

4395..4655
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_86_curated_5
unknown

Not on your lists

5321..5641
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_86_curated_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5891..6472)
DNA (582bp) protein (194aa)
Transcriptional regulator, XRE family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9Y4_NAKMY
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV81184.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6612..7919
DNA (1308bp) protein (436aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Molybdenum cofactor synthesis domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X907_NAKMY
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ACV81105.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_8
unknown

Not on your lists

comp(7933..8961)
DNA (1029bp) protein (343aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_86_curated_9
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9069..9713)
DNA (645bp) protein (215aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V292_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL04686.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_86_curated_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9886..10155
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X914_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81112.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_11
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10160..10417
DNA (258bp) protein (86aa)
Putative membrane protein n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V417_9PSEU
Putative membrane protein {ECO:0000313|EMBL:EID54870.1}; Flags: Precursor;; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_86_curated_12
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10463..10696
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AX31_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH49535.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10716..11906)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00037A948D
ROK family protein {ECO:0000313|EMBL:ERK70775.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ROK family protein
SCNpilot_cont_1000_bf_scaffold_86_curated_14
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12101..12877
DNA (777bp) protein (259aa)
amino acid ABC transporter ATP-binding protein; K10008 glutamate transport system ATP-binding protein [EC:3.6.3.-]
Amino acid ABC transporter ATP-binding protein, PAAT family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SD30_INTC7
Glutamate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWT03407.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
SCNpilot_cont_1000_bf_scaffold_86_curated_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12955..14031
DNA (1077bp) protein (359aa)
ABC transporter substrate-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B35506
ABC transporter glutamine-binding protein GlnH family protein {ECO:0000313|EMBL:ERK70773.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
extracellular solute-binding protein; K10005 glutamate transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_86_curated_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14066..14710
DNA (645bp) protein (215aa)
ABC transporter permease n=1 Tax=Microbacteriaceae RepID=UPI00036AF420
ABC transporter, permease protein {ECO:0000313|EMBL:ERK70772.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
binding-protein-dependent transporter inner membrane component; K10006 glutamate transport system permease protein
SCNpilot_cont_1000_bf_scaffold_86_curated_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14707..15648
DNA (942bp) protein (314aa)
polar amino acid ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B358FE
ABC transporter, permease protein {ECO:0000313|EMBL:ERK70771.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
polar amino acid ABC transporter inner membrane protein; K10007 glutamate transport system permease protein
SCNpilot_cont_1000_bf_scaffold_86_curated_18
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15675..16670
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000374FED3
Asparaginase {ECO:0000313|EMBL:ETK37341.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_86_curated_19
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16798..17586
DNA (789bp) protein (263aa)
copper homeostasis protein CutC n=1 Tax=Glaciibacter superstes RepID=UPI0003B30D8A
Copper homeostasis protein CutC {ECO:0000313|EMBL:ETK37340.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
CutC family protein; K06201 copper homeostasis protein
SCNpilot_cont_1000_bf_scaffold_86_curated_20
unknown

Not on your lists

comp(17626..18102)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_86_curated_21
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18115..19884)
DNA (1770bp) protein (590aa)
YD repeat protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum (strain PC1) RepID=C6DCS8_PECCP
YD repeat-containing protein
YD repeat protein {ECO:0000313|EMBL:ACT14253.1}; TaxID=561230 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (strain PC1).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20134..20871
DNA (738bp) protein (246aa)
phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X942_NAKMY
SCNpilot_cont_1000_bf_scaffold_86_curated_23
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20968..21879
DNA (912bp) protein (304aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol/serineO-phosphatidyltransfera se {ECO:0000313|EMBL:ACV81141.1}; EC=2.7.8.8 {ECO:0000313|EMBL:ACV81141.1};; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
CDP-diacylglycerol/serineO-phosphatidyltransfera se n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X943_NAKMY
SCNpilot_cont_1000_bf_scaffold_86_curated_24
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21925..22221)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X944_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81142.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22507..23664)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X945_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81143.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23913..25334)
DNA (1422bp) protein (474aa)
amidase; K01426 amidase [EC:3.5.1.4]
Amidase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X946_NAKMY
Amidase {ECO:0000313|EMBL:ACV81144.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_27
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25585..26859
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9W5_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81165.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_86_curated_28
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27220..29685
DNA (2466bp) protein (822aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B720DE
Acyltransferase 3 {ECO:0000313|EMBL:EHB68050.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
acyltransferase
SCNpilot_cont_1000_bf_scaffold_86_curated_29
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29746..30180)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QBB4_9ACTO
Deazaflavin-dependent nitroreductase {ECO:0000313|EMBL:EPD97083.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_86_curated_trna_4
unknown

Not on your lists

comp(30259..30331)
DNA (73bp)
transferRNA
Displaying items 1-30 of 207 in total

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