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SCNpilot_cont_1000_bf_scaffold_51_curated

Search features with annotation key words

Displaying items 1-30 of 656 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_51_curated_1
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1407
DNA (1407bp) protein (469aa)
Aminotransferase class V n=1 Tax=Micromonospora sp. (strain L5) RepID=E8SAF4_MICSL
class V aminotransferase
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:ADL46595.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_cont_1000_bf_scaffold_51_curated_2
Mycobacterium immunogenum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1876..2409)
DNA (534bp) protein (178aa)
Alpha-crystallin n=15 Tax=Mycobacterium abscessus RepID=I6ZHB1_MYCAB
Um strain SMUC14 PROKKA_contig000003, whole genome shotgun sequence {ECO:0000313|EMBL:KIU41871.1}; TaxID=83262 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium immunogenum.;"
hspX; alpha-crystallin
SCNpilot_cont_1000_bf_scaffold_51_curated_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2870..4318
DNA (1449bp) protein (483aa)
amidase; K01426 amidase [EC:3.5.1.4]
Amidase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SM25_NOCSJ
Amidase {ECO:0000313|EMBL:ABL82860.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_1000_bf_scaffold_51_curated_4
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4475..5770
DNA (1296bp) protein (432aa)
arsenic transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4BCCE
membrane efflux protein
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
SCNpilot_cont_1000_bf_scaffold_51_curated_5
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5787..6128)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ73_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:KGN42010.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_51_curated_6
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6410..6856)
DNA (447bp) protein (149aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Ribonuclease VapC n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIG1_MICPN
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_51_curated_7
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7144..7656
DNA (513bp) protein (171aa)
DNA-binding protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V242_9MICC
DNA-binding protein {ECO:0000313|EMBL:EMY34152.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
Cro/CI family transcriptional regulator/nucleotidyltransferase; K07075
SCNpilot_cont_1000_bf_scaffold_51_curated_8
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7678..8082
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0DYK0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH69568.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_51_curated_9
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8102..8812)
DNA (711bp) protein (237aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCV8_INTC7
SCNpilot_cont_1000_bf_scaffold_51_curated_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8931..9890
DNA (960bp) protein (320aa)
Aldo/keto reductase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8V5_NAKMY
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACV81053.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_51_curated_11
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9887..11218
DNA (1332bp) protein (444aa)
fucose permease n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B37BAA
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEG43415.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
SCNpilot_cont_1000_bf_scaffold_51_curated_12
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11215..12291
DNA (1077bp) protein (359aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037393E3
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
SCNpilot_cont_1000_bf_scaffold_51_curated_13
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12513..13622
DNA (1110bp) protein (370aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2YQX0_9NOCA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETK36062.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_51_curated_14
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13619..14800
DNA (1182bp) protein (394aa)
ABC transporter permease n=1 Tax=Salinispora pacifica RepID=UPI000368E6FB
transport system permease; K02015 iron complex transport system permease protein
Tax=RBG_16_Actinobacteria_68_21_curated
SCNpilot_cont_1000_bf_scaffold_51_curated_15
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14802..15746
DNA (945bp) protein (315aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q3Q8_CATAD
ABC transporter related {ECO:0000313|EMBL:ACU77666.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_cont_1000_bf_scaffold_51_curated_16
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15743..16273
DNA (531bp) protein (177aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328};; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
cobU; cobinamide kinase/cobinamide phosphate guanylyltransferase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
adenosylcobinamide kinase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B21C
SCNpilot_cont_1000_bf_scaffold_51_curated_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16273..16992
DNA (720bp) protein (240aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Adenosylcobinamide-GDP ribazoletransferase; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
cobS; cobalamin 5'-phosphate synthase (EC:2.7.8.26); K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Cobalamin synthase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CBW9_9RHOB
SCNpilot_cont_1000_bf_scaffold_51_curated_18
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

16998..18329
DNA (1332bp) protein (444aa)
putative threonine-phosphate decarboxylase (EC:4.1.1.81)
Putative threonine-phosphate decarboxylase {ECO:0000313|EMBL:BAN01477.1}; EC=4.1.1.81 {ECO:0000313|EMBL:BAN01477.1};; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Serinicoccus profundi RepID=UPI000255E293
SCNpilot_cont_1000_bf_scaffold_51_curated_19
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18326..19456
DNA (1131bp) protein (377aa)
nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Micromonospora sp. (strain L5) RepID=E8RXT9_MICSL
SCNpilot_cont_1000_bf_scaffold_51_curated_20
unknown

Not on your lists

19440..19544
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_51_curated_21
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19541..20278
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Frankia sp. EUN1f RepID=D3D479_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC82291.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_51_curated_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20368..22002)
DNA (1635bp) protein (545aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12]
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJV2_NAKMY
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ACV76635.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_51_curated_23
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22141..23094)
DNA (954bp) protein (318aa)
proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8]
Proline dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJV1_NAKMY
Proline dehydrogenase {ECO:0000313|EMBL:ACV76634.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_51_curated_24
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23257..24009
DNA (753bp) protein (251aa)
TetR family transcriptional regulator n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BS16_STRBB
TetR family transcriptional regulator {ECO:0000313|EMBL:KKA37423.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_51_curated_25
unknown

Not on your lists

comp(23975..24673)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_51_curated_26
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24670..25221)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RYX3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25930.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
SCNpilot_cont_1000_bf_scaffold_51_curated_27
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25236..26663)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RYX4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25931.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
SCNpilot_cont_1000_bf_scaffold_51_curated_28
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26716..28488)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RYX5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25932.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
SCNpilot_cont_1000_bf_scaffold_51_curated_29
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28485..29306)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RYX6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25933.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
SCNpilot_cont_1000_bf_scaffold_51_curated_30
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29383..30390
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2K7E4_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY90620.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
Displaying items 1-30 of 656 in total

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