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SCNpilot_cont_1000_bf_scaffold_73_curated_5

Organism: scnpilot_dereplicated_Actinobacteria_1

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(4414..5493)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003465CE3 similarity UNIREF
DB: UNIREF100
  • Identity: 32.2
  • Coverage: 298.0
  • Bit_score: 164
  • Evalue 2.40e-37
Basic membrane protein {ECO:0000313|EMBL:EEG52287.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.3
  • Coverage: 375.0
  • Bit_score: 145
  • Evalue 1.60e-31
nucleoside-binding protein similarity KEGG
DB: KEGG
  • Identity: 28.9
  • Coverage: 377.0
  • Bit_score: 139
  • Evalue 2.00e-30

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Taxonomy

[Clostridium] asparagiforme → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1080
ATGAAACGCATGTCCTTCATGGCGACGATCGCTGCAACCGCTATCGTCGCGTTGGTGCTCTCCGCCTGCGGTAGCGCCAACAAATCGTCCACTGATACCTCGTCCGGGCAGCAAAGCACCGCCACATCCAACAAGTCAGATAACCCGTCCGAAAGTTCCTCTACAAGCGGTGGGCCTACAAGTGGTGGGCCGATCAAGGTAGGCGTGGCACTCGCAGGCCCGCGTAACGATGGCGCCTTCTACCAGTCCTATTACGACGGTGTAATGGATCTGAAGGACAAGTACAACCTGCAGGTCTCCGTAGTGGATAACCTCACCGATTCATCGGCCATGAACGACGCGCTCAGCAACCTAGCCGAGGCCAACCAGATCGTCATCGGCGGCGGGAGCGCTCTGGTGCCGCCCGCCAACAGCCTGGCCGCAAATTACCCAGACACCACCTTCGTGATGAGCGGCAAAGTGCAGGACGGAATCCCGAATTTGCACGCTTACAACATGTTGCAAGGGGTACCCGCGTACGTGGCGGGAGTGGTGGCGGCCAAGGTGAGTAAGGCCGGCAAGATCGGATTTATCGGCGGCGCAACCATCCCTTCCACCAGCCAGTCGGATATCGACTTCGAAGCGGGCGCCAAATCGGTCAATCCCAATATTGGATACTCACATGTCACGGTCGGGAGCTTCAGCGATGCGGCTAAGGGCCAACAGGCAGCGATGGCTCAGATCGCGGACGGCGTCGATGTGATCTACGCATTCCTCGATGCCGGGCTCCCAGGCGTCATCAAGGCTATCGATGAATCCGGTAAAGATGTGAAGCTCTTCAATCCGACGACGGACCGATGCGATGAAAGTCCGCACATCATCGGCTACGACATGCAGAATCTCAAGGCAATGGTCGCCGACATCTTCCGCGACTACACCTCGAACAAACTGCCTGCCGGCACGACGAGCATCGCCATCGAGGACAAGGACGTGCAGTGGTGGACGATGTGCCCGAACGCCAAAGAATGGCAGGCCACAGCGGATGGCGTGGCCGATCAGATCAACGCGGGCAAGATCAAGATGCCGGAAGGTGGCATGTAG
PROTEIN sequence
Length: 360
MKRMSFMATIAATAIVALVLSACGSANKSSTDTSSGQQSTATSNKSDNPSESSSTSGGPTSGGPIKVGVALAGPRNDGAFYQSYYDGVMDLKDKYNLQVSVVDNLTDSSAMNDALSNLAEANQIVIGGGSALVPPANSLAANYPDTTFVMSGKVQDGIPNLHAYNMLQGVPAYVAGVVAAKVSKAGKIGFIGGATIPSTSQSDIDFEAGAKSVNPNIGYSHVTVGSFSDAAKGQQAAMAQIADGVDVIYAFLDAGLPGVIKAIDESGKDVKLFNPTTDRCDESPHIIGYDMQNLKAMVADIFRDYTSNKLPAGTTSIAIEDKDVQWWTMCPNAKEWQATADGVADQINAGKIKMPEGGM*