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SCNpilot_cont_1000_bf_scaffold_73_curated_21

Organism: scnpilot_dereplicated_Actinobacteria_1

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 19002..19607

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0DXY3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 201.0
  • Bit_score: 351
  • Evalue 7.70e-94
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 201.0
  • Bit_score: 352
  • Evalue 3.70e-94
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 201.0
  • Bit_score: 349
  • Evalue 5.40e-94

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Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGCCCGTTACACCGGACCCGTCACCAAGAAGTCCCGTCGCCTGCGCACCGACCTGGTCGGCGGCGACATGTCCTTCGACCGCCGGCCGTTCCCCCCGGGGCAGCACGGCCGCGCGCGCATCAAGGAGAAGGAATACCTGACGCAGCTGCAGGAGAAGCAGAAGGCCCGCTTCACCTACGGCGTCATGGAGAAGCAGTTCAGCCGGTACTACAAGGAGGCCGCGGGGCGCTCCGGCAAGACCGGTGACAACCTGCTGCAGATCCTCGAGTCGCGCTTGGACAACGTCGTCTACCGCGCAGGTTTGGCGCGCACCCGTCGCGCTGCTCGCCAGCTCGTCACCCACGGCCATCTCGAGGTCAACGGTCAGCGCGTCGACGTGCCCAGCTACCGGGTCGAGCAATACGACATCGTCACCGTGCGCAAGCAGTCGGTGGAGAAGTTCCCGTTCGAGCTGGCCCGCGAGACCTACGGCGAGCGGCATGTGCCGGCCTGGATGCAGGTCGTGCCCGGCTCGCTGCAGATCCTCATCCATCAGCTCCCGGTTCGGGAGCAGATCGAGTCGCAGCTCACCGAACAGCTCATCGTCGAGTACTACTCGAAGTAG
PROTEIN sequence
Length: 202
MARYTGPVTKKSRRLRTDLVGGDMSFDRRPFPPGQHGRARIKEKEYLTQLQEKQKARFTYGVMEKQFSRYYKEAAGRSGKTGDNLLQILESRLDNVVYRAGLARTRRAARQLVTHGHLEVNGQRVDVPSYRVEQYDIVTVRKQSVEKFPFELARETYGERHVPAWMQVVPGSLQILIHQLPVREQIESQLTEQLIVEYYSK*