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SCNpilot_cont_1000_bf_scaffold_73_curated_24

Organism: scnpilot_dereplicated_Actinobacteria_1

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 21738..22661

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 290.0
  • Bit_score: 334
  • Evalue 4.70e-89
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multi similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 290.0
  • Bit_score: 334
  • Evalue 2.10e-88
tRNA pseudouridine synthase A n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCL6_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 290.0
  • Bit_score: 334
  • Evalue 1.50e-88

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGTCCGGCAGTGACGCGAGCGTGGCTGGGCCGATGCGGCTCCGCTTGGACCTCTCGTACGACGGCACCGATTTCTCCGGCTGGGCAGTGCAGCCAGGGCGTCGCACCGTGGCCGGCGTGCTGGGCGAGGCCCTGGCCACGCTGTTCCGCAGGCCGGTGCCCTTGGTGGTCGCGGGCCGCACGGACGCCGGTGTTCACGCGACCGGGCAGGTCGCACATATCGACGTGGATCCCGACGGCTTAGCGGCACTCGCGCCTCGAGGTCTAGCTGGGCAGACGGGGAATGGCGCGGACGCGGGCGTGATCGGTCTGCGGCGGCGGCTGGCCGGACTGCTGCCACCCGACGTCCGCGTCCCTGTGATCGGTGCGGCGCCGGACGGGTTCGACGCGCGATTCTCGGCCCTGCGACGGCACTATCGCTATCGGATCGTGTGCTCCGATTGGGGTGTGCCGCCGCTGGGGCGGGCCGATGTACTGGCGTGGCGGCGGCAGCTCGACGTGCACGCGATGCAGGACGCCGCCGATCCAATGCTGGGTCTGCATGACTTCGCGGCGTACTGCAAACCGCGGGCCGGTGGAACGACCGTCCGCGACCTGCAACGGCTCACCATCGCCCGCGTTCCGCCACCGGCGAAGGACTGCGCCCTCATCGAGATCGACGTCACGGCCGACGCGTTCTGTCACTCGATGGTGCGAAGCCTGGTCGGCGCGCTGATCGCGGTCGGCGAGCGGAGGTTCGAGGTGGACCGGCCCGCGCAGTTGCTCGCGGCGCGGCAACGGACGGAGCACATTTCGGTGGCTCCCGCCCGCGGGCTGACCCTGATCGGCGTCGACTATCCCCCCGACGCGATGCTCGCCGACCGGGCCGCGGCGACCCGGGCACTGCGCGAGGATCCGTGCGATTGCGGCGGGCTCGAGCGGTGA
PROTEIN sequence
Length: 308
MSGSDASVAGPMRLRLDLSYDGTDFSGWAVQPGRRTVAGVLGEALATLFRRPVPLVVAGRTDAGVHATGQVAHIDVDPDGLAALAPRGLAGQTGNGADAGVIGLRRRLAGLLPPDVRVPVIGAAPDGFDARFSALRRHYRYRIVCSDWGVPPLGRADVLAWRRQLDVHAMQDAADPMLGLHDFAAYCKPRAGGTTVRDLQRLTIARVPPPAKDCALIEIDVTADAFCHSMVRSLVGALIAVGERRFEVDRPAQLLAARQRTEHISVAPARGLTLIGVDYPPDAMLADRAAATRALREDPCDCGGLER*