ggKbase home page

SCNpilot_cont_1000_bf_scaffold_396_curated_7

Organism: scnpilot_dereplicated_Actinobacteria_1

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 5964..6869

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 300.0
  • Bit_score: 317
  • Evalue 4.50e-84
Pseudouridine synthase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CB57_MYCTH similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 298.0
  • Bit_score: 328
  • Evalue 6.10e-87
Uncharacterized protein {ECO:0000313|EMBL:KBZ68807.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis TKK-01-0051.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 296.0
  • Bit_score: 330
  • Evalue 3.00e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium tuberculosis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 906
GTGAAGAGCCCACCCCCGCTGCCCGATCGCGACGGCGTCTCCGCGGCCCGGCTCACCATGCCGCGAGGCGGAGCGTGGCCCACGGTGGCGGCGTTCCTGCTGGAGCGCACGCACGGCGCCGAGGAGGTGCGCCGCCGGTTGGCCGCCGGCGAGGTGGTGCTGGGCGACGGCAGCGTGGTGGGCGCCGAGACGCCCTACCGCGGCGGCGAAACCGTCTACCTGTACCGCGATCTGCCCGACGAGGCGCCGGTTCCGGGCGAGATCGACGTGCTGTACGCCGATTCCGACATCGTGGTCGTCGACAAGCCGCATTTCCTGGCGACCATGCCGCGCGGACGGCACGTGGTGCAGACGGTCGTGGTGCGGATGCGACGGCAGCTCGGCCTGCCGCAGTTGTCCCCCGCGCACCGCCTGGACCGGCTCACCGCCGGCGTGCTGCTGCTCACCGTCCGGCCTGAGGTGCGCGGCGCGTACCAGCTCCTGTTCGAGCGGCGCGAGGTCGCGAAGACCTACCTCGCCCTGGCGCCGATCCGCGGTGACCTACGGCTTCCGACCGTGGTCCGATCGCGAATCGTCAAGCCCCGCACCAGCATTCAGGCGGTGGAGGTACCCGGCGAGGCGAACGCCGTCACCCACGTCGACCTCGAAAGCGCGTTCACCGCACCCGACGGCCGCGTGCTCGGCCGCTACCGGCTCACGCCGCTCACCGGCCGCACGCACCAGCTGCGGGTGCACCTCGCGCGCCTCGGCATCCCCATCGTGAACGACCCGCTGTACCCGGTGCTGCAGGAGCACCGGCCGGGTGATTTCTCCCGGCCGCTGCGGCTGCTGGCATCGACCCTCGAGTTCACCGACCCGCTGTCCGGCCGGTCGCGGCGGTTCACCTCGAGGCGGTCGCTCCTATGA
PROTEIN sequence
Length: 302
VKSPPPLPDRDGVSAARLTMPRGGAWPTVAAFLLERTHGAEEVRRRLAAGEVVLGDGSVVGAETPYRGGETVYLYRDLPDEAPVPGEIDVLYADSDIVVVDKPHFLATMPRGRHVVQTVVVRMRRQLGLPQLSPAHRLDRLTAGVLLLTVRPEVRGAYQLLFERREVAKTYLALAPIRGDLRLPTVVRSRIVKPRTSIQAVEVPGEANAVTHVDLESAFTAPDGRVLGRYRLTPLTGRTHQLRVHLARLGIPIVNDPLYPVLQEHRPGDFSRPLRLLASTLEFTDPLSGRSRRFTSRRSLL*