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SCNpilot_cont_1000_bf_scaffold_396_curated

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_396_curated_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

418..1260
DNA (843bp) protein (281aa)
D-aminopeptidase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BC19_STRRD
D-aminopeptidase; K02035 peptide/nickel transport system substrate-binding protein
D-aminopeptidase {ECO:0000313|EMBL:ACZ88042.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_2
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1405..1824
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LJ58_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL17066.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_1000_bf_scaffold_396_curated_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1718..2155)
DNA (438bp) protein (146aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SN63_NOCSJ
alkylhydroperoxidase
SCNpilot_cont_1000_bf_scaffold_396_curated_4
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2249..3154)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI000367212C
LysR family transcriptional regulator {ECO:0000313|EMBL:EIF88808.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_396_curated_5
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3278..4321
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037CC93B
Uncharacterized protein {ECO:0000313|EMBL:EME97938.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_396_curated_6
Deinococcus sp. RL, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

4381..5862
DNA (1482bp) protein (494aa)
yeaP; diguanylate cyclase YeaP (EC:2.7.7.65); K13069 diguanylate cyclase [EC:2.7.7.65]
diguanylate cyclase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034689D7
Uncharacterized protein {ECO:0000313|EMBL:KEF33396.1}; TaxID=1489678 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus sp. RL.;"
SCNpilot_cont_1000_bf_scaffold_396_curated_7
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5964..6869
DNA (906bp) protein (302aa)
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Pseudouridine synthase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CB57_MYCTH
Uncharacterized protein {ECO:0000313|EMBL:KBZ68807.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis TKK-01-0051.;"
SCNpilot_cont_1000_bf_scaffold_396_curated_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6922..7452
DNA (531bp) protein (177aa)
SNARE associated Golgi protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X884_NAKMY
hypothetical protein
SNARE associated Golgi protein {ECO:0000313|EMBL:ACV77060.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7421..9736)
DNA (2316bp) protein (772aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI0003743BC4
superfamily I DNA and RNA helicase-like protein
SCNpilot_cont_1000_bf_scaffold_396_curated_10
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9812..10465)
DNA (654bp) protein (218aa)
Methyltransferase type 12 n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LS52_ACIC1
Methyltransferase {ECO:0000313|EMBL:KEI44965.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
type 12 methyltransferase
SCNpilot_cont_1000_bf_scaffold_396_curated_11
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10525..11718)
DNA (1194bp) protein (398aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
ackA; acetate kinase; K00925 acetate kinase [EC:2.7.2.1] rbh
Acetate kinase n=1 Tax=Williamsia sp. D3 RepID=V8D1U2_9ACTO
SCNpilot_cont_1000_bf_scaffold_396_curated_12
Dermacoccus nishinomiyaensis, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11724..14006)
DNA (2283bp) protein (761aa)
Phosphate acetyltransferase {ECO:0000256|PIRNR:PIRNR006107}; EC=2.3.1.8 {ECO:0000256|PIRNR:PIRNR006107};; Phosphotransacetylase {ECO:0000256|PIRNR:PIRNR006107}; TaxID=1274 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus nishinomiyaensis.;"
phosphate acetyltransferase (EC:2.3.1.8); K13788 phosphate acetyltransferase [EC:2.3.1.8]
Phosphate acetyltransferase n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3BD48_9MICO
SCNpilot_cont_1000_bf_scaffold_396_curated_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14030..15394
DNA (1365bp) protein (455aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7C0_NAKMY
major facilitator superfamily protein; K06902 MFS transporter, UMF1 family
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV76989.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_14
Mycobacterium sp. VKM Ac-1817D, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15391..15783
DNA (393bp) protein (131aa)
Putative fluoride ion transporter CrcB n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VBT0_MYCFO
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1273687 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. VKM Ac-1817D.;"
Integral membrane protein possibly involved in chromosome condensation
SCNpilot_cont_1000_bf_scaffold_396_curated_15
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15789..16154
DNA (366bp) protein (122aa)
Putative fluoride ion transporter CrcB n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QUA4_MYCS2
crcB2; CrcB2
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_16
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16151..18151)
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003806112
von Willebrand factor type A-like protein; K07114 uncharacterized protein
von Willebrand factor type A-like protein {ECO:0000313|EMBL:ADX73283.1}; Flags: Precursor;; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_17
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18436..19281
DNA (846bp) protein (282aa)
Transposase IS3/IS911 family protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C021_BEUC1
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACQ79207.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_18
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19396..21048
DNA (1653bp) protein (551aa)
peptidase S1 and S6 chymotrypsin/Hap; K01362 [EC:3.4.21.-]
septum formation initiator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B481F8
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:CCH79974.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
SCNpilot_cont_1000_bf_scaffold_396_curated_19
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21169..21978)
DNA (810bp) protein (270aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI0003731CFB
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ETK38014.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
SCNpilot_cont_1000_bf_scaffold_396_curated_20
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22093..22662)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B739F4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP78930.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_21
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22978..23625
DNA (648bp) protein (216aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X2P6_9PSEU
Transcription regulatory protein devR (DosR) {ECO:0000313|EMBL:AHH96584.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
Transcriptional regulator, DosR family
SCNpilot_cont_1000_bf_scaffold_396_curated_22
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23659..24813)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI0003641505
Histidine kinase,GAF domain-containing protein {ECO:0000313|EMBL:EHR50984.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
GAF sensor signal transduction histidine kinase
SCNpilot_cont_1000_bf_scaffold_396_curated_23
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24891..27347
DNA (2457bp) protein (819aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TX12_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE11000.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_396_curated_24
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27502..28935)
DNA (1434bp) protein (478aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA34_NAKMY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACV81234.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_25
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29121..30575)
DNA (1455bp) protein (485aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22]
4-aminobutyrate aminotransferase apoenzyme {ECO:0000313|EMBL:ABL82707.1}; EC=2.6.1.19 {ECO:0000313|EMBL:ABL82707.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
4-aminobutyrate aminotransferase apoenzyme n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLM2_NOCSJ
SCNpilot_cont_1000_bf_scaffold_396_curated_26
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30635..32170
DNA (1536bp) protein (512aa)
Regulatory protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JTS0_STREN
regulatory protein
Regulatory protein {ECO:0000313|EMBL:AEW96840.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_27
unknown

Not on your lists

32201..32563
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_396_curated_28
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32753..33991)
DNA (1239bp) protein (413aa)
bifunctional D-altronate/D-mannonate dehydratase n=1 Tax=Curtobacterium sp. B18 RepID=UPI0003474F0D
Bifunctional D-altronate/D-mannonate dehydratase {ECO:0000313|EMBL:EYT61877.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
rspA; starvation sensing protein; K08323 starvation sensing protein RspA
SCNpilot_cont_1000_bf_scaffold_396_curated_29
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(34042..34836)
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZR5_SOLUE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABJ84850.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_1000_bf_scaffold_396_curated_30
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34833..36269)
DNA (1437bp) protein (479aa)
Putative uncharacterized protein n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7M9N2_BRAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU84576.1}; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860).;"
Displaying items 1-30 of 43 in total

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