ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_1000_bf_scaffold_296_curated_20

Organism: scnpilot_dereplicated_Actinobacteria_1

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 18807..19181

Top 3 Functional Annotations

Value Algorithm Source
twitching motility protein PilT n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000380AC88 similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 134
  • Evalue 7.00e-29
PilT protein-like protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 132
  • Evalue 8.40e-29
PilT protein-like protein {ECO:0000313|EMBL:ACL71706.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 132
  • Evalue 3.80e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thioalkalivibrio sulfidiphilus → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
GTGATACTCGCGGACACGTCGGTATGGATAACCCACTTCCGAAGCGGCGACGCCGATCTCGCGCGGGCGTTGCGGCGCAGCAATGTCCGTTCCCACCCATGGATCATCGGTGAACTGGCCATGGGCAACTTGACCGATCGTCAACGCACGTTGACGGACCTGCGTCGATTGCCGCCGTCCGTGGTGGCCACGGTGGATGAGATCGGGTCCTTCGTCGAGCGCAATGCCCTGTTCGGCCGGGGCATCGGCTTTGTCGATGCGGGTCTGCTCGCCGCGACGGCGCTCACTTCCGGCACGAGGCTGTGGACGACGGATCGTCGGCTGCAGTCTGTCGCCCGGGATCTCGGATTGGCGGCGGATTCTGCCGCCGACTGA
PROTEIN sequence
Length: 125
VILADTSVWITHFRSGDADLARALRRSNVRSHPWIIGELAMGNLTDRQRTLTDLRRLPPSVVATVDEIGSFVERNALFGRGIGFVDAGLLAATALTSGTRLWTTDRRLQSVARDLGLAADSAAD*