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SCNpilot_cont_1000_bf_scaffold_296_curated

Search features with annotation key words

Displaying items 1-30 of 226 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_296_curated_1
unknown

Not on your lists

2..184
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_296_curated_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(439..1533)
DNA (1095bp) protein (365aa)
Folate-binding protein YgfZ n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB16_NAKMY
folate-binding protein YgfZ; K06980
Folate-binding protein YgfZ {ECO:0000313|EMBL:ACV81308.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1593..2588
DNA (996bp) protein (332aa)
pantothenate kinase; K00867 type I pantothenate kinase [EC:2.7.1.33]
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_00215}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Pantothenate kinase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB15_NAKMY
SCNpilot_cont_1000_bf_scaffold_296_curated_4
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2622..3524)
DNA (903bp) protein (301aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RYM3_LEIAQ
ABC transporter permease {ECO:0000313|EMBL:KFG00920.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_296_curated_5
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3541..4662)
DNA (1122bp) protein (374aa)
Carbohydrate ABC transporter membrane protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BAP2_SANKS
carbohydrate ABC transporter membrane protein; K02025 multiple sugar transport system permease protein
Carbohydrate ABC transporter membrane protein {ECO:0000313|EMBL:ACZ20593.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_6
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4755..6143)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00035F5869
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFG00921.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_296_curated_7
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6215..7249)
DNA (1035bp) protein (345aa)
LacI family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W894_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:EYR65130.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
LacI family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_296_curated_8
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7400..9457
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AV03_STRRD
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:KGM12560.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_296_curated_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9525..11162
DNA (1638bp) protein (546aa)
phosphoglucomutase; K01835 phosphoglucomutase [EC:5.4.2.2]
Phosphoglucomutase, alpha-D-glucose phosphate-specific n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAZ3_NAKMY
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:ACV81285.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_10
unknown

Not on your lists

11198..11905
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B43111
SCNpilot_cont_1000_bf_scaffold_296_curated_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11902..12546)
DNA (645bp) protein (215aa)
UPF0678 fatty acid-binding protein-like protein Namu_4989 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA62_NAKMY
hypothetical protein
UPF0678 fatty acid-binding protein-like protein Namu_4989 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_12
unknown

Not on your lists

comp(12552..12650)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_296_curated_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12696..13607
DNA (912bp) protein (304aa)
mycothiol biosynthesis acetyltransferase; K15520 mycothiol synthase [EC:2.3.1.189]
Mycothiol acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01698}; Short=MSH acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01698};; EC=2.3.1.189 {ECO:0000255|HAMAP-Rule:MF_01698};; Mycothiol synthase {ECO:0000255|HAMAP-Rule:MF_01698}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Mycothiol acetyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=MSHD_NAKMY
SCNpilot_cont_1000_bf_scaffold_296_curated_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13656..15881)
DNA (2226bp) protein (742aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA49_NAKMY
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:ACV81249.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15965..16411)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA48_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81248.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16408..17586)
DNA (1179bp) protein (393aa)
TIM-barrel protein, nifR3 family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA47_NAKMY
hypothetical protein
TIM-barrel protein, nifR3 family {ECO:0000313|EMBL:ACV81247.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17614..18183
DNA (570bp) protein (190aa)
prolyl-tRNA synthetase n=1 Tax=Saccharomonospora saliphila RepID=UPI00037EA69B
YbaK/prolyl-tRNA synthetase associated domain-containing protein
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:ACV81246.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_18
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18205..18522)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3UXS9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC80577.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
putative nucleotidyltransferase
SCNpilot_cont_1000_bf_scaffold_296_curated_19
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18619..18810
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2DNW7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK84702.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
transcriptional regulator of the Arc/MetJ class
SCNpilot_cont_1000_bf_scaffold_296_curated_20
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18807..19181
DNA (375bp) protein (125aa)
twitching motility protein PilT n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000380AC88
PilT protein-like protein; K07062
PilT protein-like protein {ECO:0000313|EMBL:ACL71706.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19217..20167)
DNA (951bp) protein (317aa)
Luciferase-like monooxygenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA45_NAKMY
luciferase-like monooxygenase
Luciferase-like monooxygenase {ECO:0000313|EMBL:ACV81245.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_22
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20216..21832)
DNA (1617bp) protein (539aa)
gabD2; succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C5G1_BEUC1
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACQ80152.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_23
Arthrobacter aurescens, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21860..22711)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036E2C2C
hypothetical protein
Putative Integral membrane protein DUF6 {ECO:0000313|EMBL:ABM09835.1}; TaxID=290340 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter aurescens (strain TC1).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_24
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22734..23687
DNA (954bp) protein (318aa)
Cation diffusion facilitator family transporter n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZX46_9ACTO
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EFE65156.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
CDF family cobalt/cadmium/zinc transporter; K03295 cation efflux system protein, CDF family
SCNpilot_cont_1000_bf_scaffold_296_curated_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23697..24227
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBK7_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77469.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24241..24663
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBK6_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77468.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_27
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24798..26372
DNA (1575bp) protein (525aa)
tail sheath protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B557AC
tail sheath protein; K06907
Tail sheath protein {ECO:0000313|EMBL:ACV77467.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26420..26896
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBK4_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77466.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_29
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26893..27384
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBK3_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77465.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_296_curated_30
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27436..27609
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B58AEE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77464.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying items 1-30 of 226 in total

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