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SCNpilot_cont_1000_bf_scaffold_296_curated_127

Organism: scnpilot_dereplicated_Actinobacteria_1

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 150420..151175

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037E27A2 similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 241.0
  • Bit_score: 248
  • Evalue 6.70e-63
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 244.0
  • Bit_score: 245
  • Evalue 6.10e-62
rex; AT-rich DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 241.0
  • Bit_score: 243
  • Evalue 6.80e-62

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Taxonomy

Amycolatopsis azurea → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 756
GTGAGCACGATAGTCGCGGACGGTGCTACTCCGGGCGAGCCCGCGCGCCTGCCCACCATAGGCGCGGCGCCGGAGCCCGGCTTACGGCTGCGCACGATCCCGGAGGCGACGGTCGCCCGGCTCACCACGTACCTGCGGGTACTGGACCGCTGCGCGCTCGTGGGCGCGGAGCTGCGTGTCGACGGCACGATCTCGTCCGATGAGCTGGCCGCATTGGTCGGCATCAACCCCGCGAAACTCCGGAAAGACCTGTCGTATCTCGGGTCTCACGGAACCCGAGGTGTCGGCTATGACGCCGCCGCGTTGCGCTCGACGCTGCAACAGGCGCTCGGCGCGCACGAGACCTATCCGGTGGCGGTGGTCGGCGTCGGACATCTCGGCAGCGCGCTGGCGGCCTACCCGGGCTTTCCCGCCCGCGGCTTCCCCGTCCGCGCCCTGTTCGACACCGATCCGCTGAAGATCGGCCGCCCGGTCGCCGGGATCACCGTGTCCGATATCCGCGAGGCGGCCTTGGTGTGCCGCCGTGAGGATGTCGTCATCGGCGTCATCGCGACGCCGGAGCCGGCCGCGCAGCGGGTCGCGGACGTGCTGGTCGCCGCCGGCGTCCGGTCCATTCTGGGCTTCGCGCCGGGACAGCTCACGGTTCCCGCCGATGTCGAGGTGCGGCGGGTCGACCTGGCACTGGAGTTGCAACTGCTGGCATTCCACGAGATACGCCGTGGCGACGTCGCGGCTGCACGGCAGGCGGTGCCATGA
PROTEIN sequence
Length: 252
VSTIVADGATPGEPARLPTIGAAPEPGLRLRTIPEATVARLTTYLRVLDRCALVGAELRVDGTISSDELAALVGINPAKLRKDLSYLGSHGTRGVGYDAAALRSTLQQALGAHETYPVAVVGVGHLGSALAAYPGFPARGFPVRALFDTDPLKIGRPVAGITVSDIREAALVCRREDVVIGVIATPEPAAQRVADVLVAAGVRSILGFAPGQLTVPADVEVRRVDLALELQLLAFHEIRRGDVAAARQAVP*