ggKbase home page

SCNpilot_cont_750_p_scaffold_839_curated

Search features with annotation key words

Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_839_curated_31
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23232..24473)
DNA (1242bp) protein (414aa)
diguanylate phosphodiesterase n=1 Tax=Aeromonas caviae RepID=UPI0002198281
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KGY76674.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
EAL domain-containing protein; K07181 putative signal transduction protein containing EAL and modified HD-GYP domains
SCNpilot_cont_750_p_scaffold_839_curated_32
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24590..25846)
DNA (1257bp) protein (419aa)
long-chain fatty acid transporter n=1 Tax=Aeromonas caviae RepID=UPI0002198282
Long-chain fatty acid transporter {ECO:0000313|EMBL:KGY76675.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
long-chain fatty acid transport protein; K06076 long-chain fatty acid transport protein
SCNpilot_cont_750_p_scaffold_839_curated_33
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26097..27368)
DNA (1272bp) protein (424aa)
long-chain fatty acid outer membrane transporter n=1 Tax=Aeromonas caviae RepID=UPI0002198283
Long-chain fatty acid outer membrane transporter {ECO:0000313|EMBL:KEP91620.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
fadL1; long-chain fatty acid transport protein 1; K06076 long-chain fatty acid transport protein
SCNpilot_cont_750_p_scaffold_839_curated_34
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27777..28520)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002198284
Uncharacterized protein {ECO:0000313|EMBL:KGY72654.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_839_curated_35
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28513..29103)
DNA (591bp) protein (197aa)
RNA polymerase sigma factor n=2 Tax=Aeromonas salmonicida subsp. salmonicida RepID=A4SMU7_AERS4
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_750_p_scaffold_839_curated_36
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29134..30678)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002198286
Uncharacterized protein {ECO:0000313|EMBL:KDV01824.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_839_curated_37
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30675..32132)
DNA (1458bp) protein (486aa)
von Willebrand factor type A domain-containing protein n=1 Tax=Aeromonas caviae RepID=UPI0002198287
von Willebrand factor A {ECO:0000313|EMBL:KGY72652.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
von Willebrand factor A; K07114 uncharacterized protein
SCNpilot_cont_750_p_scaffold_839_curated_38
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32154..33116)
DNA (963bp) protein (321aa)
von Willebrand factor A n=1 Tax=Aeromonas caviae RepID=UPI000219849B
von Willebrand factor A {ECO:0000313|EMBL:KGY72651.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
von Willebrand factor A; K07114 uncharacterized protein
SCNpilot_cont_750_p_scaffold_839_curated_39
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33113..33670)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI000219849C
Uncharacterized protein {ECO:0000313|EMBL:KGY76680.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_839_curated_40
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33655..34545)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI000219849D
Uncharacterized protein {ECO:0000313|EMBL:KDV01577.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_839_curated_41
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34574..35524)
DNA (951bp) protein (317aa)
MoxR protein; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase AAA n=1 Tax=Aeromonas caviae RepID=UPI000219849E
ATPase AAA {ECO:0000313|EMBL:KDV01578.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
SCNpilot_cont_750_p_scaffold_839_curated_42
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35708..37018
DNA (1311bp) protein (437aa)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022530}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01618};; 3-ketoacyl-CoA thiolase; ACSs {ECO:0000256|HAMAP-Rule:MF_01618}; Acetyl-CoA acyltransferase {ECO:0000256|HAMAP-Rule:MF_01618}; Acyl-CoA ligase {ECO:0000256|HAMAP-Rule:MF_01618}; Beta-ketothiolase {ECO:0000256|HAMAP-Rule:MF_01618}; Fatty acid oxidation complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01618}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria;
fadI; 3-ketoacyl-CoA thiolase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
3-ketoacyl-CoA thiolase n=1 Tax=Aeromonas caviae RepID=UPI000219849F
SCNpilot_cont_750_p_scaffold_839_curated_43
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37015..39165
DNA (2151bp) protein (717aa)
Fatty oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
fatty-acid oxidation protein subunit alpha n=1 Tax=Aeromonas caviae RepID=UPI00021984A0
Fatty acid oxidation complex subunit alpha {ECO:0000256|SAAS:SAAS00051619}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
SCNpilot_cont_750_p_scaffold_839_curated_44
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39428..39568
DNA (141bp) protein (47aa)
TIGR02808 family protein n=1 Tax=Aeromonas veronii AER39 RepID=K1IH71_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERF63105.1}; TaxID=1347420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas veronii Hm21.;"
SCNpilot_cont_750_p_scaffold_839_curated_45
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39758..40315
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI00021984A2
Uncharacterized protein {ECO:0000313|EMBL:KDV01721.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
YaeQ
SCNpilot_cont_750_p_scaffold_839_curated_46
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40327..41211
DNA (885bp) protein (295aa)
transporter n=1 Tax=Aeromonas caviae RepID=UPI00021984A3
Transporter {ECO:0000313|EMBL:KGY76685.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
auxin efflux carrier; K07088
SCNpilot_cont_750_p_scaffold_839_curated_47
Shewanella putrefaciens, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41277..41381
DNA (105bp) protein (35aa)
Putative uncharacterized protein n=1 Tax=Shewanella putrefaciens (strain 200) RepID=E6XHP8_SHEP2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV56323.1}; TaxID=399804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella putrefaciens (strain 200).;"
Displaying items 31-47 of 47 in total

View Taxonomy