ggKbase home page

SCNpilot_cont_750_p_scaffold_839_curated_35

Organism: scnpilot_dereplicated_Aeromonas_1

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38 MC: 3
Location: comp(28513..29103)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Aeromonas salmonicida subsp. salmonicida RepID=A4SMU7_AERS4 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 196.0
  • Bit_score: 359
  • Evalue 2.80e-96
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 196.0
  • Bit_score: 398
  • Evalue 4.40e-108
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 196.0
  • Bit_score: 359
  • Evalue 8.70e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aeromonas sp. HZM → Aeromonas → Aeromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGCGTTAGGTTTTTTCAGAAGAAAAAGGGCCGACACGGGAAAGGATCCCTGCGCTTCTCCGGTCTATGAAGAGATGGCAGACAAACAAACCAAGTACGAAGCCCTGGTGCACGCCCTGCACGGGGACATCTACCGCTACGCCTACTGGTTGTGCCGGGATCCGCAAATCGCCGAGGATCTGGTGCAGGAGACTTTCCTGCGCGCCTGGAAGGCGATAGATACCCTGCTGGACGACAAGGCTGCCAAGGCGTGGCTCATCACCATATTGCGGCGGGAGAATGCCCGCCGCTTTGAGCGAAAGCAGTTCGATCTTGTCGACCTCGACGAGCACCCCCTGCGGGATCAGGGTGTCCTGCCAAGCGAGCAGGAGATGGAGCACGAATGGCTCAGGCGCCACATCGCCCGCCTGCCTGCCGAATATCAGGAGCCGCTGCTGCTGCAGGTACTGGGGGGATTCAGCGGGGAAGAGATCGCCGAGCAACTCGGCCTGAACAAGAACACCGTCATGACAAGGCTGTTTCGCGCCCGCAACCAGATAAAAGAGGCCATGGAGTCTGCGAAACAACAGAGAGGACACACCAATGGATGA
PROTEIN sequence
Length: 197
MALGFFRRKRADTGKDPCASPVYEEMADKQTKYEALVHALHGDIYRYAYWLCRDPQIAEDLVQETFLRAWKAIDTLLDDKAAKAWLITILRRENARRFERKQFDLVDLDEHPLRDQGVLPSEQEMEHEWLRRHIARLPAEYQEPLLLQVLGGFSGEEIAEQLGLNKNTVMTRLFRARNQIKEAMESAKQQRGHTNG*