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SCNpilot_cont_750_p_scaffold_1434_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1434_curated_1
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(598..807)
DNA (210bp) protein (70aa)
Cold shock-like protein CspA n=2 Tax=Bacteria RepID=K1JTL5_AERHY
Cold shock-like protein CspA {ECO:0000313|EMBL:EKB29988.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1434_curated_2
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1103..1762)
DNA (660bp) protein (220aa)
opacity-associated protein A n=1 Tax=Aeromonas caviae RepID=UPI0002198764
Opacity-associated protein A {ECO:0000313|EMBL:KEP89317.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
opacity-associated protein A
SCNpilot_cont_750_p_scaffold_1434_curated_3
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1862..3964)
DNA (2103bp) protein (701aa)
methyl-accepting chemotaxis protein n=1 Tax=Aeromonas caviae RepID=UPI0002198763
Chemotaxis protein {ECO:0000313|EMBL:KGY78980.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
methyl-accepting chemotaxis transducer
SCNpilot_cont_750_p_scaffold_1434_curated_4
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4228..5643
DNA (1416bp) protein (472aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
glutamate tRNA synthetase, catalytic subunit; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
glutaminyl-tRNA synthetase n=1 Tax=Aeromonas caviae RepID=UPI0002198762
SCNpilot_cont_750_p_scaffold_1434_curated_trna_1
unknown

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6027..6099
DNA (73bp)
transferRNA
SCNpilot_cont_750_p_scaffold_1434_curated_trna_2
unknown

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6121..6193
DNA (73bp)
transferRNA
SCNpilot_cont_750_p_scaffold_1434_curated_trna_3
unknown

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6260..6332
DNA (73bp)
transferRNA
SCNpilot_cont_750_p_scaffold_1434_curated_trna_4
unknown

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6463..6533
DNA (71bp)
transferRNA
SCNpilot_cont_750_p_scaffold_1434_curated_5
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7151..9292)
DNA (2142bp) protein (714aa)
nuclease n=1 Tax=Aeromonas caviae RepID=UPI0002198760
Nuclease {ECO:0000313|EMBL:KGY69762.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
nuclease
SCNpilot_cont_750_p_scaffold_1434_curated_6
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9782..12820
DNA (3039bp) protein (1013aa)
chitinase n=1 Tax=Aeromonas caviae RepID=UPI000219875F
Uncharacterized protein {ECO:0000313|EMBL:KDV03593.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
chitodextrinase
SCNpilot_cont_750_p_scaffold_1434_curated_7
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13163..14398)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI000219875E
TPR-repeat-containing protein {ECO:0000313|EMBL:KGY69766.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1434_curated_8
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14410..15045)
DNA (636bp) protein (212aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Aeromonas caviae RepID=UPI000219875D
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDV03591.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
periplasmic protein TonB2
SCNpilot_cont_750_p_scaffold_1434_curated_9
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15062..15469)
DNA (408bp) protein (136aa)
biopolymer transporter ExbD n=1 Tax=Aeromonas caviae RepID=UPI000219875C
Uncharacterized protein {ECO:0000313|EMBL:EKB29746.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
TonB system transport protein ExbD2; K03559 biopolymer transport protein ExbD
SCNpilot_cont_750_p_scaffold_1434_curated_10
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15536..16063)
DNA (528bp) protein (176aa)
biopolymer transporter ExbB n=1 Tax=Aeromonas caviae RepID=UPI000219875B
Biopolymer transporter ExbB {ECO:0000313|EMBL:KDV03589.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
exbB2; TonB system transport protein ExbB2; K03561 biopolymer transport protein ExbB
SCNpilot_cont_750_p_scaffold_1434_curated_11
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16074..17447)
DNA (1374bp) protein (458aa)
biopolymer transporter ExbB n=1 Tax=Aeromonas caviae RepID=UPI000219875A
Biopolymer transporter ExbB {ECO:0000313|EMBL:KGY69769.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
hypothetical protein; K03561 biopolymer transport protein ExbB
SCNpilot_cont_750_p_scaffold_1434_curated_12
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17444..18208)
DNA (765bp) protein (255aa)
biopolymer transporter TonB n=1 Tax=Aeromonas caviae RepID=UPI0002198759
Energy transducer TonB {ECO:0000313|EMBL:KGY78989.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
TonB system biopolymer transport component
SCNpilot_cont_750_p_scaffold_1434_curated_13
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18311..20917)
DNA (2607bp) protein (869aa)
TonB-dependent receptor n=1 Tax=Aeromonas caviae RepID=UPI0002198758
TonB-dependent receptor {ECO:0000313|EMBL:KEP89328.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_750_p_scaffold_1434_curated_14
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21657..22682
DNA (1026bp) protein (342aa)
peptide ABC transporter permease n=1 Tax=Aeromonas caviae RepID=UPI0002198757
Peptide ABC transporter permease {ECO:0000313|EMBL:KDV03585.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
oligopeptide transport system permease OppB
SCNpilot_cont_750_p_scaffold_1434_curated_15
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22685..23728
DNA (1044bp) protein (348aa)
peptide ABC transporter permease n=1 Tax=Aeromonas caviae RepID=UPI0002198525
Peptide ABC transporter permease {ECO:0000313|EMBL:KDV03584.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
appC; ABC-type oligopeptide transport system, permease protein; K13895 microcin C transport system permease protein
SCNpilot_cont_750_p_scaffold_1434_curated_16
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23811..25628
DNA (1818bp) protein (606aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Aeromonas caviae RepID=UPI0002198524
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGY78993.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
oligopeptide-binding protein OppA
SCNpilot_cont_750_p_scaffold_1434_curated_17
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25654..26691
DNA (1038bp) protein (346aa)
peptide ABC transporter ATPase n=1 Tax=Aeromonas caviae RepID=UPI0002198523
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEP89333.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
oligopeptide transport ATP-binding protein OppD; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_p_scaffold_1434_curated_18
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26786..27787
DNA (1002bp) protein (334aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Aeromonas caviae RepID=UPI0002198522
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEP89334.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
oligopeptide transport ATP-binding protein AppF; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_p_scaffold_1434_curated_19
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28033..28152)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Aeromonas media WS RepID=K2I7W3_AERME
Uncharacterized protein {ECO:0000313|EMBL:AHX59775.1}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas media WS.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1434_curated_20
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28417..29868)
DNA (1452bp) protein (484aa)
aminoacyl-histidine dipeptidase n=1 Tax=Aeromonas caviae RepID=UPI0002198520
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:KGY69775.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
aminoacyl-histidine dipeptidase
SCNpilot_cont_750_p_scaffold_1434_curated_21
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30262..30351
DNA (90bp) protein (30aa)
Putative uncharacterized protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) RepID=A0KNR3_AERHH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK37485.1}; TaxID=380703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 /; JCM 1027 / KCTC 2358 / NCIMB 9240).;"
SCNpilot_cont_750_p_scaffold_1434_curated_22
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31882..32244)
DNA (363bp) protein (121aa)
late control protein D n=1 Tax=Aeromonas hydrophila RepID=UPI00030B8252
Late control protein D {ECO:0000313|EMBL:KGY72163.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
hypothetical protein; K06905
Displaying 26 items

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