ggKbase home page

SCNpilot_cont_750_p_scaffold_613_curated

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_613_curated_1
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125..436
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DB0
Uncharacterized protein {ECO:0000313|EMBL:KDV04777.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_613_curated_2
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(433..642)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DB1
Uncharacterized protein {ECO:0000313|EMBL:KGY79627.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_613_curated_3
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

942..2351
DNA (1410bp) protein (470aa)
antiporter n=1 Tax=Aeromonas caviae RepID=UPI0002197DB2
Antiporter {ECO:0000313|EMBL:KEP91162.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
Na+/H+ antiporter NhaC
SCNpilot_cont_750_p_scaffold_613_curated_4
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2457..3380
DNA (924bp) protein (308aa)
LysR family transcriptional regulator n=1 Tax=Aeromonas caviae RepID=UPI0002197DB3
LysR family transcriptional regulator {ECO:0000313|EMBL:KGY70422.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
transcriptional regulator
SCNpilot_cont_750_p_scaffold_613_curated_5
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3576..4721
DNA (1146bp) protein (382aa)
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DB4
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDV04781.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
ABC transporter substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_613_curated_6
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4794..5807
DNA (1014bp) protein (338aa)
ABC transporter ATP-binding protein n=1 Tax=Aeromonas RepID=UPI000344C62F
ABC transporter ATP-binding protein
Polyamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGY70424.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
SCNpilot_cont_750_p_scaffold_613_curated_7
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5804..6772
DNA (969bp) protein (323aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Aeromonas hydrophila RepID=UPI000348087E
Uncharacterized protein {ECO:0000313|EMBL:EKB26981.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein
SCNpilot_cont_750_p_scaffold_613_curated_8
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6762..7595
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Aeromonas hydrophila SSU RepID=K1JGG6_AERHY
Uncharacterized protein {ECO:0000313|EMBL:EKB26982.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
ABC transporter permease
SCNpilot_cont_750_p_scaffold_613_curated_9
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7625..9055
DNA (1431bp) protein (477aa)
Gamma-aminobutyraldehyde dehydrogenase {ECO:0000313|EMBL:KDV04785.1}; EC=1.2.1.19 {ECO:0000313|EMBL:KDV04785.1};; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
gamma-aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
Gamma-aminobutyraldehyde dehydrogenase n=1 Tax=Aeromonas hydrophila ML09-119 RepID=R4VZG1_AERHY
SCNpilot_cont_750_p_scaffold_613_curated_10
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9178..10083)
DNA (906bp) protein (302aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
cyoE; protoheme IX farnesyltransferase (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
protoheme IX farnesyltransferase n=1 Tax=Aeromonas caviae RepID=UPI0002197DB9
SCNpilot_cont_750_p_scaffold_613_curated_11
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10080..11090)
DNA (1011bp) protein (337aa)
cytochrome B561 n=1 Tax=Aeromonas caviae RepID=UPI0002197DBA
Cytochrome B561 {ECO:0000313|EMBL:KGY70429.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
cytochrome oxidase assembly protein; K02259 cytochrome c oxidase assembly protein subunit 15
SCNpilot_cont_750_p_scaffold_613_curated_12
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11150..11632)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DBB
Uncharacterized protein {ECO:0000313|EMBL:KGY78725.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_613_curated_13
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11629..12354)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DBC
Uncharacterized protein {ECO:0000313|EMBL:KGY68329.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_613_curated_14
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12373..12579
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DBD
Uncharacterized protein {ECO:0000313|EMBL:KDV04790.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_613_curated_15
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12588..13469)
DNA (882bp) protein (294aa)
Cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
MFS transporter n=1 Tax=Aeromonas caviae RepID=UPI0002197DBE
MFS transporter {ECO:0000313|EMBL:KGY68331.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
SCNpilot_cont_750_p_scaffold_613_curated_16
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13472..14026)
DNA (555bp) protein (185aa)
cytochrome C oxidase assembly protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DBF
Cytochrome C oxidase assembly protein {ECO:0000313|EMBL:KEP91175.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
cytochrome C oxidase assembly protein
SCNpilot_cont_750_p_scaffold_613_curated_17
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14036..15634)
DNA (1599bp) protein (533aa)
cytochrome c oxidase subunit I type; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
cytochrome oxidase subunit I n=1 Tax=Aeromonas caviae RepID=UPI0002197DC0
Cytochrome oxidase subunit I {ECO:0000313|EMBL:KEP91176.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
SCNpilot_cont_750_p_scaffold_613_curated_18
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15644..16846)
DNA (1203bp) protein (401aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
cytochrome c oxidase, subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] rbh
cytochrome B559 subunit alpha n=1 Tax=Aeromonas caviae RepID=UPI0002197DC1
SCNpilot_cont_750_p_scaffold_613_curated_19
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17140..19212)
DNA (2073bp) protein (691aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein; K06957 tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DC2
SCNpilot_cont_750_p_scaffold_613_curated_20
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19209..19523)
DNA (315bp) protein (105aa)
transcriptional regulator n=1 Tax=Aeromonas caviae RepID=UPI0002197DC3
Transcriptional regulator {ECO:0000313|EMBL:KDV04796.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
transcriptional activator HlyU
SCNpilot_cont_750_p_scaffold_613_curated_21
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19662..19868
DNA (207bp) protein (69aa)
(2Fe-2S)-binding protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DC4
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KGY70438.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_613_curated_22
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20000..20479
DNA (480bp) protein (160aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
bacterioferritin n=1 Tax=Aeromonas caviae RepID=UPI0002197DC5
bfr; bacterioferritin; K03594 bacterioferritin
SCNpilot_cont_750_p_scaffold_613_curated_23
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20610..21188
DNA (579bp) protein (193aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3); K01734 methylglyoxal synthase [EC:4.2.3.3]
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=380703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 /; JCM 1027 / KCTC 2358 / NCIMB 9240).;"
Methylglyoxal synthase n=2 Tax=Aeromonas hydrophila RepID=A0KPS3_AERHH
SCNpilot_cont_750_p_scaffold_613_curated_24
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21253..21840)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DC7
Uncharacterized protein {ECO:0000313|EMBL:KDV04800.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_613_curated_25
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22226..23212
DNA (987bp) protein (329aa)
membrane protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DC8
Membrane protein {ECO:0000313|EMBL:KGY68337.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
Ca2+/Na+ antiporter; K07301 inner membrane protein
SCNpilot_cont_750_p_scaffold_613_curated_26
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23307..24365)
DNA (1059bp) protein (353aa)
L-asparaginase II {ECO:0000313|EMBL:KGY68338.1}; EC=3.5.1.1 {ECO:0000313|EMBL:KGY68338.1};; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
type II L-asparaginase (EC:3.5.1.1); K01424 L-asparaginase [EC:3.5.1.1]
L-asparaginase n=1 Tax=Aeromonas caviae RepID=UPI0002197DC9
SCNpilot_cont_750_p_scaffold_613_curated_27
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24495..24689)
DNA (195bp) protein (65aa)
mercuric reductase n=1 Tax=Aeromonas caviae RepID=UPI0002197DCA
Mercuric reductase {ECO:0000313|EMBL:KDV04803.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
copper-transporting ATPase Ran1
SCNpilot_cont_750_p_scaffold_613_curated_28
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24801..25751)
DNA (951bp) protein (317aa)
transporter n=1 Tax=Aeromonas caviae RepID=UPI0002197DCB
Transporter {ECO:0000313|EMBL:KGY78704.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
transporter; K07088
SCNpilot_cont_750_p_scaffold_613_curated_29
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25886..26833
DNA (948bp) protein (316aa)
trehalose repressor n=1 Tax=Aeromonas caviae RepID=UPI0002197DCC
Trehalose repressor {ECO:0000313|EMBL:KEP91200.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
Trehalose operon repressor; K03485 LacI family transcriptional regulator, trehalose operon repressor
SCNpilot_cont_750_p_scaffold_613_curated_30
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27020..28450
DNA (1431bp) protein (477aa)
PTS maltose transporter subunit IIBC n=1 Tax=Aeromonas caviae RepID=UPI0002197DCD
PTS system trehalose(Maltose)-specific transporter subunits IIBC {ECO:0000313|EMBL:KGY78702.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
PTS system trehalose(maltose)-specific transporter subunits IIBC
Displaying items 1-30 of 55 in total

View Taxonomy