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SCNpilot_cont_750_p_scaffold_402_curated

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_402_curated_1
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

363..1559
DNA (1197bp) protein (399aa)
heme transporter CcmB n=1 Tax=Aeromonas caviae RepID=UPI0002198475
Heme transporter CcmB {ECO:0000313|EMBL:KGY78575.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
heme/copper membrane protein; K07234 uncharacterized protein involved in response to NO
SCNpilot_cont_750_p_scaffold_402_curated_2
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1560..2132)
DNA (573bp) protein (191aa)
XRE family transcriptional regulator n=1 Tax=Aeromonas caviae RepID=UPI0002198474
XRE family transcriptional regulator {ECO:0000313|EMBL:KEP91026.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
DNA-binding protein
SCNpilot_cont_750_p_scaffold_402_curated_3
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2246..3397
DNA (1152bp) protein (384aa)
membrane protein n=1 Tax=Aeromonas caviae RepID=UPI0002198473
Membrane protein {ECO:0000313|EMBL:KGY78573.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
benzoate transporter; K05782 benzoate membrane transport protein
SCNpilot_cont_750_p_scaffold_402_curated_4
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3545..4609
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002198472
Uncharacterized protein {ECO:0000313|EMBL:KGY78572.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_402_curated_5
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4673..5569)
DNA (897bp) protein (299aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
5,10-methylenetetrahydrofolate reductase n=1 Tax=Aeromonas caviae RepID=UPI0002198471
SCNpilot_cont_750_p_scaffold_402_curated_6
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5897..6688
DNA (792bp) protein (264aa)
acetyltransferase n=1 Tax=Aeromonas caviae RepID=UPI0002198470
Acetyltransferase {ECO:0000313|EMBL:KEP90965.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
acetyltransferase
SCNpilot_cont_750_p_scaffold_402_curated_7
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6749..8212)
DNA (1464bp) protein (488aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Aeromonas caviae RepID=UPI000219846F
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGY78569.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
sugar ABC transporter periplasmic protein
SCNpilot_cont_750_p_scaffold_402_curated_8
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8221..10200)
DNA (1980bp) protein (660aa)
chemotaxis protein n=1 Tax=Aeromonas caviae RepID=UPI000219846E
Chemotaxis protein {ECO:0000313|EMBL:KEP90967.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
SCNpilot_cont_750_p_scaffold_402_curated_9
Aeromonas sp. Ah1sa5, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10398..11009)
DNA (612bp) protein (204aa)
Outer membrane protein n=1 Tax=Aeromonas sp. Ah1sa5 RepID=T1W1X7_9GAMM
Outer membrane protein {ECO:0000313|EMBL:AGT98635.1}; TaxID=1388765 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. Ah1sa5.;"
outer membrane protein W
SCNpilot_cont_750_p_scaffold_402_curated_10
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11335..11460
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Aeromonas media WS RepID=K2HHI0_AERME
Uncharacterized protein {ECO:0000313|EMBL:AHE51293.1}; TaxID=1354302 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila 4AK4.;"
SCNpilot_cont_750_p_scaffold_402_curated_11
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11577..14405)
DNA (2829bp) protein (943aa)
excinuclease ABC subunit A n=1 Tax=Aeromonas caviae RepID=UPI000219846B
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
SCNpilot_cont_750_p_scaffold_402_curated_12
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14499..15137)
DNA (639bp) protein (213aa)
LuxR family transcriptional regulator n=1 Tax=Aeromonas caviae RepID=UPI000219846A
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDV01920.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
csgAB operon transcriptional regulatory protein
SCNpilot_cont_750_p_scaffold_402_curated_13
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15655..16224
DNA (570bp) protein (190aa)
single-stranded DNA-binding protein n=1 Tax=Aeromonas caviae RepID=UPI0002198469
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
Single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
SCNpilot_cont_750_p_scaffold_402_curated_14
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16386..17156
DNA (771bp) protein (257aa)
polar amino acid ABC transporter n=1 Tax=Aeromonas caviae RepID=UPI000219856E
Polar amino acid ABC transporter {ECO:0000313|EMBL:KDV03016.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
ABC polar amino acid transport system
SCNpilot_cont_750_p_scaffold_402_curated_15
unknown

Not on your lists

17153..17242
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_402_curated_16
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17203..17325)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Aeromonas media WS RepID=K2HHI8_AERME
Uncharacterized protein {ECO:0000313|EMBL:AHE51298.1}; TaxID=1354302 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila 4AK4.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_402_curated_17
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17621..17905
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002198570
Uncharacterized protein {ECO:0000313|EMBL:KGY78562.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_402_curated_18
unknown

Not on your lists

comp(18149..18247)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_402_curated_19
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18298..18507
DNA (210bp) protein (70aa)
cold-shock protein n=1 Tax=Aeromonas caviae RepID=UPI0002198571
Cold-shock protein {ECO:0000313|EMBL:KDV03018.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
cspA; major cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_750_p_scaffold_402_curated_20
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18685..20070)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
histidine kinase n=1 Tax=Aeromonas caviae RepID=UPI0002198572
sensor histidine kinase
SCNpilot_cont_750_p_scaffold_402_curated_21
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20078..20800)
DNA (723bp) protein (241aa)
chemotaxis protein CheY n=1 Tax=Aeromonas caviae RepID=UPI0002198573
Chemotaxis protein CheY {ECO:0000313|EMBL:KGY79615.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
winged helix family two component transcriptional regulator
SCNpilot_cont_750_p_scaffold_402_curated_22
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21000..21356
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002198574
Uncharacterized protein {ECO:0000313|EMBL:KDV03021.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_402_curated_23
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21647..23641
DNA (1995bp) protein (665aa)
methyl-accepting chemotaxis protein n=1 Tax=Aeromonas caviae RepID=UPI0002198575
Chemotaxis protein {ECO:0000313|EMBL:KGY70603.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
SCNpilot_cont_750_p_scaffold_402_curated_24
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23704..24117)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002198576
Uncharacterized protein {ECO:0000313|EMBL:KGY78558.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_402_curated_25
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24249..25250)
DNA (1002bp) protein (334aa)
diguanylate cyclase n=1 Tax=Aeromonas caviae RepID=UPI0002198577
Diguanylate cyclase {ECO:0000313|EMBL:KDV03024.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
sensory box protein
SCNpilot_cont_750_p_scaffold_402_curated_26
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25637..25975
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II 1 n=1 Tax=Aeromonas caviae RepID=UPI0002198578
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:KGY78556.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
glnK; nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2
SCNpilot_cont_750_p_scaffold_402_curated_27
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26001..27242
DNA (1242bp) protein (414aa)
ammonium transporter n=1 Tax=Aeromonas caviae RepID=UPI000219879D
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
amt; ammonium transporter; K03320 ammonium transporter, Amt family
SCNpilot_cont_750_p_scaffold_402_curated_28
Yersinia ruckeri, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27866..28471
DNA (606bp) protein (202aa)
UPI0003C80183 related cluster n=1 Tax=unknown RepID=UPI0003C80183
Uncharacterized protein {ECO:0000313|EMBL:KFE37233.1}; TaxID=29486 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia ruckeri.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_402_curated_29
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28748..30802)
DNA (2055bp) protein (685aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
recD; exodeoxyribonuclease V subunit alpha (EC:3.1.11.5); K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
exodeoxyribonuclease V subunit alpha n=1 Tax=Aeromonas caviae RepID=UPI000219879E
SCNpilot_cont_750_p_scaffold_402_curated_30
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30811..34425)
DNA (3615bp) protein (1205aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
exodeoxyribonuclease V subunit beta n=1 Tax=Aeromonas caviae RepID=UPI000219879F
exodeoxyribonuclease V subunit beta
Displaying items 1-30 of 66 in total

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