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SCNpilot_cont_750_p_scaffold_115_curated

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Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_115_curated_1
Aeromonas molluscorum, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..102)
DNA (102bp) protein (34aa)
Elongation factor Tu n=1 Tax=Aeromonas veronii AMC34 RepID=K1J7U4_9GAMM
elongation factor Tu
Elongation factor Tu {ECO:0000313|EMBL:EOD54916.1}; Flags: Fragment;; TaxID=1268236 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas molluscorum 848.;"
SCNpilot_cont_750_p_scaffold_115_curated_trna_4
unknown

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comp(278..349)
DNA (72bp)
transferRNA
SCNpilot_cont_750_p_scaffold_115_curated_trna_3
unknown

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comp(391..472)
DNA (82bp)
transferRNA
SCNpilot_cont_750_p_scaffold_115_curated_2
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

736..1674
DNA (939bp) protein (313aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_00215}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
coaA; pantothenate kinase (EC:2.7.1.33); K00867 type I pantothenate kinase [EC:2.7.1.33]
Pantothenate kinase n=2 Tax=Bacteria RepID=K1J4S7_AERHY
SCNpilot_cont_750_p_scaffold_115_curated_3
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1751..2716)
DNA (966bp) protein (322aa)
bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor n=1 Tax=Aeromonas caviae RepID=UPI00021989DB
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin operon repressor {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
SCNpilot_cont_750_p_scaffold_115_curated_4
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2713..3750)
DNA (1038bp) protein (346aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158]
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Aeromonas caviae RepID=UPI00021989DC
SCNpilot_cont_750_p_scaffold_115_curated_5
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3876..4529
DNA (654bp) protein (218aa)
potassium transporter KtrA n=1 Tax=Aeromonas caviae RepID=UPI00021989DD
Potassium transporter KtrA {ECO:0000313|EMBL:KDV03959.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
potassium uptake protein KtrA; K03499 trk system potassium uptake protein TrkA
SCNpilot_cont_750_p_scaffold_115_curated_6
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4526..5881
DNA (1356bp) protein (452aa)
Ktr system potassium transporter B n=1 Tax=Aeromonas caviae RepID=UPI00021989DE
Ktr system potassium transporter B {ECO:0000313|EMBL:KDV03960.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
KtrB; K03498 trk system potassium uptake protein TrkH
SCNpilot_cont_750_p_scaffold_115_curated_7
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5954..7951)
DNA (1998bp) protein (666aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
DNA topoisomerase; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase III n=1 Tax=Aeromonas hydrophila RepID=UPI00037837DD
SCNpilot_cont_750_p_scaffold_115_curated_8
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8250..9380
DNA (1131bp) protein (377aa)
cytochrome C n=1 Tax=Aeromonas caviae RepID=UPI00021989E0
Cytochrome C {ECO:0000313|EMBL:KEP90228.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
cytochrome c-type protein TorC
SCNpilot_cont_750_p_scaffold_115_curated_9
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9403..11883
DNA (2481bp) protein (827aa)
molybdopterin guanine dinucleotide-containing S/N-oxide reductase family protein; K07812 trimethylamine-N-oxide reductase (cytochrome c) 2 [EC:1.7.2.3]
trimethylamine N-oxide reductase I catalytic subunit n=1 Tax=Aeromonas caviae RepID=UPI00021989E1
Trimethylamine N-oxide reductase I catalytic subunit {ECO:0000313|EMBL:KGY68519.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
SCNpilot_cont_750_p_scaffold_115_curated_10
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12245..12706)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DD5
Uncharacterized protein {ECO:0000313|EMBL:KGY78501.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_115_curated_11
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12809..14155)
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
histidine kinase n=1 Tax=Aeromonas caviae RepID=UPI0002197DD6
sensor histidine kinase
SCNpilot_cont_750_p_scaffold_115_curated_12
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14187..14843)
DNA (657bp) protein (219aa)
Two-component system response regulator n=1 Tax=Aeromonas media WS RepID=K2HCR0_AERME
Transcriptional regulator {ECO:0000313|EMBL:KGY78500.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
two-component system response regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_cont_750_p_scaffold_115_curated_13
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14931..15263)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DD8
Uncharacterized protein {ECO:0000313|EMBL:KEP90233.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_115_curated_14
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15333..15575
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DD9
Uncharacterized protein {ECO:0000313|EMBL:KDV03968.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_115_curated_15
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15586..16239)
DNA (654bp) protein (218aa)
sulfite oxidase subunit YedZ n=1 Tax=Aeromonas caviae RepID=UPI0002197DDA
Sulfite oxidase subunit YedZ {ECO:0000313|EMBL:KDV03969.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_115_curated_16
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16331..17341)
DNA (1011bp) protein (337aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
TMAO/DMSO reductase n=1 Tax=Aeromonas caviae RepID=UPI0002197DDB
sulfite oxidase subunit YedY; K07147
SCNpilot_cont_750_p_scaffold_115_curated_17
unknown

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comp(17413..17508)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_115_curated_18
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17713..18186
DNA (474bp) protein (158aa)
membrane protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DDD
Membrane protein {ECO:0000313|EMBL:KDV03971.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
chloride channel protein EriC
SCNpilot_cont_750_p_scaffold_115_curated_19
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18247..19527)
DNA (1281bp) protein (427aa)
response regulator n=1 Tax=Aeromonas caviae RepID=UPI0002197DDE
Response regulator GlrR {ECO:0000313|EMBL:KGY71049.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
transcriptional regulatory protein ZraR; K07715 two-component system, NtrC family, response regulator GlrR
SCNpilot_cont_750_p_scaffold_115_curated_20
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19582..20103)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DDF
Uncharacterized protein {ECO:0000313|EMBL:KGY79609.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_115_curated_21
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20197..21609)
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
two-component system sensor histidine kinase; K07711 two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
histidine kinase n=1 Tax=Aeromonas caviae RepID=UPI0002197DE0
SCNpilot_cont_750_p_scaffold_115_curated_22
unknown

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comp(21712..21804)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_115_curated_23
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21930..22475
DNA (546bp) protein (182aa)
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=1 Tax=Aeromonas caviae RepID=UPI0002197DE2
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase {ECO:0000313|EMBL:KGY78492.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
SCNpilot_cont_750_p_scaffold_115_curated_24
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22534..23238)
DNA (705bp) protein (235aa)
pteridine reductase 1 n=1 Tax=Aeromonas caviae RepID=UPI0002197DE3
Pteridine reductase {ECO:0000313|EMBL:KEP90242.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
pteridine reductase 1
SCNpilot_cont_750_p_scaffold_115_curated_25
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23398..23802
DNA (405bp) protein (135aa)
CBS domain-containing protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DE4
CBS domain containing protein {ECO:0000313|EMBL:KGY78490.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_115_curated_26
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24052..24816
DNA (765bp) protein (255aa)
glutamine transporter substrate-binding protein n=1 Tax=Aeromonas caviae RepID=UPI0002197DE5
Glutamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEP90244.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
glutamine transport system substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_115_curated_27
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24918..25379)
DNA (462bp) protein (154aa)
transcriptional regulator n=1 Tax=Aeromonas caviae RepID=UPI0002197DE6
Transcriptional regulator {ECO:0000313|EMBL:KGY68529.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
DNA-binding transcriptional regulator AsnC
SCNpilot_cont_750_p_scaffold_115_curated_28
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25534..26526
DNA (993bp) protein (331aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
asparagine synthetase AsnA (EC:6.3.1.1)
asparagine synthetase AsnA n=1 Tax=Aeromonas caviae RepID=UPI0002197DE7
Displaying items 1-30 of 171 in total

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