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SCNpilot_cont_750_p_scaffold_2159_curated_7

Organism: scnpilot_dereplicated_Aeromonas_1

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38 MC: 3
Location: 3866..7894

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2636
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 999.99
  • Bit_score: 2620
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=6 Tax=Bacteria RepID=RPOB_AERHH similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 999.99
  • Bit_score: 2620
  • Evalue 0.0

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Taxonomy

Aeromonas caviae → Aeromonas → Aeromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4029
ATGGTTTACTCTTATACCGAAAAAAAACGCATTCGTAAGGACTTCGGTAAGCGAGACCAGGTACTGGACACGCCTTATCTGTTGTCCATTCAGCTGGACTCCTTCAAGCAGTTCATCGAGGCCGACCCGGAAGGTGAATATGGCCTAGAGGCCGCTTTCCGTAGCGTTTTCCCGATCACCAGTTACTCCGGTAGTGCTGAGCTTCAGTATGTCAGCTATCGCCTGGGTGAGCCGGTATTTGACGTAAAAGAATGCCAGATCCGTGGAGTGACCTACTCCGCGCCGCTGCGTGTCAAGCTTCGTATGGTTCTGTACGACCGTGAAGCAGCTGCCGGCACCGTCAAAGATATCAAGGAACAAGAAGTATACATGGGCGAGATTCCGCTCATGACCGAGAACGGCACCTTTGTCATCAATGGTACCGAACGGGTTATCGTCTCCCAGCTGCACCGCAGCCCGGGCGTCTTCTTCGACCACGATAAAGGCAAAACACATTCATCCGGTAAGGTACTGTATAACGCCCGCGTTATCCCCTACCGTGGCTCCTGGCTGGACTTCGAGTTCGATGCGAAAGACAACCTGTTTGTCCGTATCGACCGTCGTCGCAAACTGCCGGCCTCCATTATTCTGCGCGCCCTGGACTTCAGTTCCGAAGAAATCCTGGCCACCTTCTTCGAGACCATCGGTTTCGAGGTCAAGGATGGCAAGTTGATGATGGATCTGGTGCCCGAGCGCCTGCGTGGCGAGACCGCGACCTTCGACATCATTGCCAATGGCGCCGTGGTGGTTGAAACCGGTCGTCGTGTCACTGCCCGTCACATCCGTCAGCTGGAAAAAGACGGCATCACCCAGATCGAGGTGCCGGTAGAGTATGTTGTTGGCAAAGTTGCAGCCAAGAACTACGCGCACCCGCAGACTGGTGAGATGGTTGTCACTGCCAACCAGGCGCTGAGCCTGGAAGCGGTTGCCAACCTGTCCCAAGCCGGCTTCAAGCACTTCGAGGTTCTGTTCACCAACGAACTGGATCACGGTGCCTACATGTCCGAGACCCTGCGTATCGACTCCAGCTCCAGCCGCCTGGAAGCCCTGGTCGAGATCTATCGCATGATGCGTCCGGGCGAGCCGCCCACTCGTGAAGCGGCCGAGCAGCTGTTCGAGAACCTGTTCTTCTCTTCCGAGCGTTACGACCTGTCTACCGTAGGTCGGATGAAGTTCAACCGCCGTCTGGGTCGTGAAGACGAGACCGGCGTTGGCGTGCTGACCAAAGACGATATCGTCGAGGTCATGAAGCGCCTGATCGACATCCGTAACGGTAACGACGAAGTGGACGATATCGACCACCTGGGTAACCGTCGTATTCGTTCCGTCGGTGAAATGGCCGAGAACCAGTTCCGTGTCGGTCTGGTCCGTGTCGAGCGTGCGGTGAAGGAGCGCCTGTCTCTGGGCGATCTGGACACCCTGATGCCGCAGGATCTGATCAACGCCAAGCCGATCTCCGCCGCGGTCAAAGAGTTCTTCGGTTCCAGCCAGCTGTCCCAGTTCATGGACCAGAACAACCCGCTGTCCGAAGTGACCCACAAGCGCCGTATCTCCGCGCTGGGCCCGGGCGGTCTGACCCGTGAGCGTGCCGGTTTCGAAGTTCGAGACGTACACCCGACCCACTACGGTCGTCTGTGCCCCATCGAAACGCCGGAAGGTCCGAACATCGGTCTGATCAACTCGCTGTCCGTGTATTCCCGCACCAACGAGTACGGTTTCCTCGAGACCCCGTACCGCAAGGTGATCGACGGTGTGATCACCGACGAAGTGGATTACCTGTCTGCGATTGAAGAAGGCAAGTACGTGATCGCACAGGCCAACGCCGCGACCACCGAAGATGGCCGTCTGAAAGATGAATTGATCCCGTGCCGTCACAAAGGTGAATCCACCTTTATGAACGCCGACCAGATCCAGTACATGGACGTGAGCCCGCAGCAGATCGTCTCTGTGGCAGCGGCCCTGATCCCGTTCCTGGAACACGATGACGCGAACCGCGCATTGATGGGTTCAAACATGCAACGTCAGGCTGTACCGACCCTGCGCGCTGACAAGCCGCTGGTAGGTACCGGTATGGAACGCGCAGTGGCCGTTGACTCCGGTGTGACCGTAGTGGCCAAGCGTGGCGGTATGATCGACTACGTCGATGCCTCCCGTATCGTTATCAAGGTCAACGAAGATGAGCTGCTGCCTGGCGAAGCCGGCATCGACATCTACAGCCTGACCAAATACACCCGTTCCAACCAGAACACCTGTATCAACCAGCGTCCGTGCGTGATGTTGGGTGAGCCGGTGATGGCGGGCGACGTGCTGGCTGACGGCCCGTCCACCGATCTTGGTGAACTGGCGCTGGGTCAGAACCTGCGCGTCGCGTTCATGCCGTGGAACGGTTACAACTTCGAAGACTCGATCCTGGTGAACGAGCGTGTTGTTCAGGAAGATCGCCTGACCACCATTCACATCCAGGAACTGGCCTGTATCTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACTGCTGACATCCCGAACGTGGGTGAAGCCGCTCTGTCCAAGCTGGACGAGTCCGGTATCGTCTACGTGGGTGCCGAAGTGAAGGGTGGCGACATTCTGGTCGGTAAGGTGACTCCGAAAGGTGAAACCCAGCTGACTCCGGAAGAGAAGCTGCTGCGCGCCATCTTCGGTGAGAAGGCGTCCGACGTGAAGGACTCTTCCCTGCGTGTACCGAACGGTGTGTACGGTACCGTGGTTGACGTGCAGGTCTTTACCCGCGATGGCGTGGAAAAAGACAAGCGCGCCAAAGAAATCGAAGAGATGCAGTTGAAGGAAGCGAAGAAGGACTTGACCGAAGAGTTCAAGATCCTGGAAGACGGCATTTTCGGCCGTTCCCGCAACCTGCTGCTGGCCGCCGGTTACAGCGAAGATCGTCTGAACAAGCTCGATCGTTCCAAGTGGTTTGAGCTGGCCATCGAAGATGAAGCCAAGCAAATCGAGCTGGAGCAGATCGCTGAACAGCACGTTGAGCTGAAGGCCGAGTTCGACAAGAAATTCGAGAACAAGCGTCGCAAGATCATCCAGGGCGATGACCTGGCGCCGGGCGTACTGAAGATCGTCAAGGTCTATCTGGCCGTCAAGCGTCGCATCCAGCCGGGTGACAAGATGGCGGGCCGTCACGGTAACAAGGGTGTTATCTCCAAGATCTGTCCGGTCGAGGATATGCCCCATGACGAGTACGGCCGTCCGGTCGACATCGTACTGAACCCGCTGGGTGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAGTGCACCTGGGCCTCGCGGCCAAGGGCATCGGCGAGAAGATCGACCGCATGATCAAAGAACAGCGCGAGCTGCACGAGATGCGCGAGTTCCTGCAACAGGTCTATGACCTGGGCGAGAAGGACTCCCAGCAAGTGAACATTGCCGAGCTGTCTGACGACGACGTGCGTACCCTGGTGGGTAACCTGCGTAAGGGTCTGCCGGTGGCTACACCTGTCTTTGATGGTGCCAAAGAGCGCGAAATCAAAGCCTTGCTGAAGCTGGCCGATCTGCCGGAATCCGGTCAGATCTCCCTGTTCGACGGTCGTACCGGTAACGCCTTCGAGCGCAAGGTTACCGTGGGTTACATGTACATGCTGAAGCTGAACCACCTGGTAGACGACAAGATGCACGCGCGTTCTACCGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGGTTCGGTGAGATGGAAGTGTGGGCCCTGGAGGCTTACGGTGCGGCATATACCCTGCAGGAAATGCTGACCGTCAAGTCTGACGATGTGAACGGCCGTACCAAGATGTACAAAAACATCGTGGATGGCGACCACCGTATGGAGCCGGGCATGCCCGAATCCTTCAACGTATTGCTGAAGGAAATCCGCTCTCTGGGTATCAACATCGAGCTGGACGAAGAGTAA
PROTEIN sequence
Length: 1343
MVYSYTEKKRIRKDFGKRDQVLDTPYLLSIQLDSFKQFIEADPEGEYGLEAAFRSVFPITSYSGSAELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRMVLYDREAAAGTVKDIKEQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYNARVIPYRGSWLDFEFDAKDNLFVRIDRRRKLPASIILRALDFSSEEILATFFETIGFEVKDGKLMMDLVPERLRGETATFDIIANGAVVVETGRRVTARHIRQLEKDGITQIEVPVEYVVGKVAAKNYAHPQTGEMVVTANQALSLEAVANLSQAGFKHFEVLFTNELDHGAYMSETLRIDSSSSRLEALVEIYRMMRPGEPPTREAAEQLFENLFFSSERYDLSTVGRMKFNRRLGREDETGVGVLTKDDIVEVMKRLIDIRNGNDEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRLCPIETPEGPNIGLINSLSVYSRTNEYGFLETPYRKVIDGVITDEVDYLSAIEEGKYVIAQANAATTEDGRLKDELIPCRHKGESTFMNADQIQYMDVSPQQIVSVAAALIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERAVAVDSGVTVVAKRGGMIDYVDASRIVIKVNEDELLPGEAGIDIYSLTKYTRSNQNTCINQRPCVMLGEPVMAGDVLADGPSTDLGELALGQNLRVAFMPWNGYNFEDSILVNERVVQEDRLTTIHIQELACISRDTKLGPEEITADIPNVGEAALSKLDESGIVYVGAEVKGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVYGTVVDVQVFTRDGVEKDKRAKEIEEMQLKEAKKDLTEEFKILEDGIFGRSRNLLLAAGYSEDRLNKLDRSKWFELAIEDEAKQIELEQIAEQHVELKAEFDKKFENKRRKIIQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKICPVEDMPHDEYGRPVDIVLNPLGVPSRMNIGQILEVHLGLAAKGIGEKIDRMIKEQRELHEMREFLQQVYDLGEKDSQQVNIAELSDDDVRTLVGNLRKGLPVATPVFDGAKEREIKALLKLADLPESGQISLFDGRTGNAFERKVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPESFNVLLKEIRSLGINIELDEE*