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SCNpilot_expt_1000_bf_scaffold_4009_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4009_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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472..1176
DNA (705bp) protein (235aa)
peptidase C69 n=1 Tax=Afipia birgiae RepID=UPI000314A8D7
Uncharacterized protein {ECO:0000313|EMBL:EKS34291.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
C69 family peptidase; K03568 TldD protein
SCNpilot_expt_1000_bf_scaffold_4009_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1192..1992
DNA (801bp) protein (267aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
peptidase S26A, signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NVG5_9BRAD
SCNpilot_expt_1000_bf_scaffold_4009_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2016..2585)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0P5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34294.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4009_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2722..4092)
DNA (1371bp) protein (457aa)
gshA; putative glutathione synthetase; K01919 glutamate--cysteine ligase [EC:6.3.2.2]
Glutamate-cysteine ligase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3Q8_9BRAD
Glutamate-cysteine ligase {ECO:0000313|EMBL:EKS34295.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_4009_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4192..4707)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NVG9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34297.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcriptional regulatory protein MarR family
SCNpilot_expt_1000_bf_scaffold_4009_curated_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4848..5462
DNA (615bp) protein (205aa)
Glutathione S-transferase {ECO:0000313|EMBL:EGP09145.1}; EC=2.5.1.18 {ECO:0000313|EMBL:EGP09145.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
gst; glutathione S-transferase (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=2 Tax=Bradyrhizobiaceae RepID=F7QHU2_9BRAD
SCNpilot_expt_1000_bf_scaffold_4009_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5622..7553)
DNA (1932bp) protein (644aa)
NAD-binding 3-hydroxyacyl-CoA dehydrogenase; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002FF2E4E
Uncharacterized protein {ECO:0000313|EMBL:EKS34299.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_4009_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7833..8726)
DNA (894bp) protein (298aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA C-acetyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3R2_9BRAD
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EKS34300.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_4009_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9139..10932)
DNA (1794bp) protein (598aa)
acyl-CoA dehydrogenase (EC:1.3.99.-); K00257 [EC:1.3.99.-]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYP4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34301.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_4009_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11181..11753
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NVH3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34302.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4009_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12287..12610
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000371D13A
Uncharacterized protein {ECO:0000313|EMBL:EKS34303.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Sel1 domain-containing protein; K13582 localization factor PodJL
Displaying 11 items

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