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SCNpilot_expt_1000_bf_scaffold_705_curated

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_705_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..260)
DNA (258bp) protein (86aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBP2_9BRAD
pyridine nucleotide transhydrogenase (proton pump) beta subunit
SCNpilot_expt_1000_bf_scaffold_705_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(274..594)
DNA (321bp) protein (107aa)
NAD(P) transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6B9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37036.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_705_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(607..1734)
DNA (1128bp) protein (376aa)
NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase subunit alpha n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P380_9BRAD
NAD(P)(+) transhydrogenase (AB-specific), alpha subunit {ECO:0000313|EMBL:EKS37037.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_705_curated_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1806..1958)
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P1C0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35221.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_705_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2141..2527)
DNA (387bp) protein (129aa)
Death-on-curing family protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07J58_RHOP5
death-on-curing family protein; K07341 death on curing protein
Death-on-curing family protein {ECO:0000313|EMBL:ABJ08026.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_expt_1000_bf_scaffold_705_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2524..2796)
DNA (273bp) protein (91aa)
Addiction module antidote n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNV1_RHOPX
addiction module antidote protein
Addiction module antidote {ECO:0000313|EMBL:ADU45947.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_705_curated_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2890..4788)
DNA (1899bp) protein (633aa)
oligoendopeptidase, PepF/M3 family; K08602 oligoendopeptidase F [EC:3.4.24.-]
Oligoendopeptidase F n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG04_9BRAD
Oligoendopeptidase F {ECO:0000313|EMBL:EGP09946.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_1000_bf_scaffold_705_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4944..6452
DNA (1509bp) protein (503aa)
Fis family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002E2EBED
Uncharacterized protein {ECO:0000313|EMBL:EKS37040.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
zraR; transcriptional regulator ZraR
SCNpilot_expt_1000_bf_scaffold_705_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6832..8841
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6C3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37041.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
peptidoglycan binding domain-containing protein
SCNpilot_expt_1000_bf_scaffold_705_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9235..10827
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P385_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37042.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_705_curated_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10995..11267)
DNA (273bp) protein (91aa)
UPF0335 protein HMPREF9696_02499 n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NY35_9BRAD
UPF0335 protein HMPREF9696_02499 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_705_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11476..11778)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8B9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37044.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K09948 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_705_curated_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12032..12583
DNA (552bp) protein (184aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002FD45DE
Uncharacterized protein {ECO:0000313|EMBL:EGP09953.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_705_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12580..14016
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40]
pyruvate kinase n=1 Tax=Afipia birgiae RepID=UPI0002F64AE6
SCNpilot_expt_1000_bf_scaffold_705_curated_15
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14301..15509
DNA (1209bp) protein (403aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YKJ5_9BRAD
Sulfite oxidase-like oxidoreductase {ECO:0000313|EMBL:EHR05664.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
putative oxidase; K07147
SCNpilot_expt_1000_bf_scaffold_705_curated_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15521..15832
DNA (312bp) protein (104aa)
Sulfite dehydrogenase (Cytochrome) subunit SorB {ECO:0000313|EMBL:ABE64125.1}; EC=1.8.2.1 {ECO:0000313|EMBL:ABE64125.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031B8778
cytochrome c oxidoreductase subunit B
SCNpilot_expt_1000_bf_scaffold_705_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15884..16276)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DF77CA
Uncharacterized protein {ECO:0000313|EMBL:EKS37047.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_705_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16466..16876)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030A1014
Uncharacterized protein {ECO:0000313|EMBL:EKS37048.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative signal peptide protein
SCNpilot_expt_1000_bf_scaffold_705_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17082..17672)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBQ4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37050.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_705_curated_20
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17883..18008)
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=5 Tax=Bradyrhizobiaceae RepID=B6JBZ9_OLICO
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_expt_1000_bf_scaffold_705_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18251..19354
DNA (1104bp) protein (368aa)
delta-9 acyl-phospholipid desaturase (EC:1.14.19.-); K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P394_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37052.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_705_curated_22
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19383..20351)
DNA (969bp) protein (323aa)
Putative exported protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG18_9BRAD
Putative exported protein {ECO:0000313|EMBL:EGP09960.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_705_curated_23
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20396..21379)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NY59_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35237.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
extra-cytoplasmic solute receptor family protein 187
SCNpilot_expt_1000_bf_scaffold_705_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21452..22690)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000305E8C9
Uncharacterized protein {ECO:0000313|EMBL:EKS37055.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_705_curated_25
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22707..23159)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG22_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09964.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
MaoC-like dehydratase
SCNpilot_expt_1000_bf_scaffold_705_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23182..23661)
DNA (480bp) protein (160aa)
monoamine oxidase n=1 Tax=Afipia birgiae RepID=UPI0003098B18
Uncharacterized protein {ECO:0000313|EMBL:EKS37057.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
dehydratase
SCNpilot_expt_1000_bf_scaffold_705_curated_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23767..24537
DNA (771bp) protein (257aa)
Transcriptional regulator, IclR family n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG24_9BRAD
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EGP09966.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein
SCNpilot_expt_1000_bf_scaffold_705_curated_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24544..24927)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8D1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37059.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_705_curated_29
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24970..25446
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG26_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09968.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
YbaK/prolyl-tRNA synthetase associated region
SCNpilot_expt_1000_bf_scaffold_705_curated_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25554..26552)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6E1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37061.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying items 1-30 of 69 in total

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