name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1248_curated_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(195..1313)
|
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PKN2_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1407..2504
|
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
anmK; anhydro-N-acetylmuramic acid kinase (EC:2.7.1.-); K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
anhydro-N-acetylmuramic acid kinase n=1 Tax=Afipia birgiae RepID=UPI0002E21BBD
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2586..3149)
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PEU1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07426.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K07018
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3470..4627
|
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG69_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39729.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4710..6233
|
FeS assembly protein SufB n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJN6_9BRAD
FeS assembly protein SufB {ECO:0000313|EMBL:EKS39730.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6230..6988
|
FeS assembly ATPase SufC n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHA5_AFIFE
sufC; FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
FeS assembly ATPase SufC {ECO:0000313|EMBL:EKS28441.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7001..7615
|
FeS assembly protein SufD n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAW1_9BRAD
FeS assembly protein SufD {ECO:0000313|EMBL:EKS39732.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7560..8309
|
FeS assembly protein SufD n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAW1_9BRAD
FeS assembly protein SufD {ECO:0000313|EMBL:EKS39732.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8312..9556
|
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sufS; cysteine desulfurase SufS; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PN23_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9996..10403
|
Iron-sulfur cluster assembly accessory protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJQ0_9BRAD
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:EKS40074.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
HesB/YadR/YfhF; K13628 iron-sulfur cluster assembly protein
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10415..10900
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNX1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40073.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K07343 DNA transformation protein and related proteins
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10902..11972)
|
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAW3_9BRAD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS39737.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
diguanylate cyclase; K13590 diguanylate cyclase
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12098..13486)
|
DEAD/DEAH box helicase n=1 Tax=Afipia birgiae RepID=UPI0002FA1AD0
Uncharacterized protein {ECO:0000313|EMBL:EKS40071.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
DEAD/DEAH box helicase-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13862..15349
|
peptidase C14, caspase catalytic subunit p20 n=1 Tax=Afipia birgiae RepID=UPI0002E6BCF8
Uncharacterized protein {ECO:0000313|EMBL:EKS40070.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
peptidase C14, caspase catalytic subunit p20
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15346..16116)
|
kduD; 2-deoxy-D-gluconate 3-dehydrogenase; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125]
rbh
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002EB8DC4
Uncharacterized protein {ECO:0000313|EMBL:EKS39739.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16178..18226)
|
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
DNA topoisomerase 4 subunit B n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PBQ5_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_17
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18399..18917
|
cytochrome O ubiquinol oxidase n=1 Tax=Afipia birgiae RepID=UPI00031A5264
Putative membrane protein {ECO:0000313|EMBL:EGP07411.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19589..20038
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QNJ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07410.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
twin-arginine translocation pathway signal
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_19
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20254..21312
|
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QNJ2_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21385..21783)
|
membrane protein n=1 Tax=Afipia birgiae RepID=UPI00031332E2
Uncharacterized protein {ECO:0000313|EMBL:EKS40063.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21971..23785)
|
phbC; poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly(R)-hydroxyalkanoic acid synthase, class I n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAX1_9BRAD
Poly(R)-hydroxyalkanoic acid synthase, class I {ECO:0000313|EMBL:EKS39747.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_22
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24041..24328
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000313E102
Uncharacterized protein {ECO:0000313|EMBL:EKS40061.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_23
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24546..25763
|
Aspartate aminotransferase n=2 Tax=Bradyrhizobiaceae RepID=F7QNI8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40060.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25788..27110
|
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Homoserine dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJR5_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_25
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27165..28166
|
glpX; fructose-1,6-bisphosphatase GlpX; K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11]
Fructose-1,6-bisphosphatase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNV7_9BRAD
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28180..28629
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAX4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39752.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
N-acetyltransferase GCN5
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28639..29349
|
haloacid dehalogenase n=1 Tax=Afipia birgiae RepID=UPI0003019B96
Haloacid dehalogenase, type II {ECO:0000313|EMBL:EKS39753.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29494..31161
|
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG98_9BRAD
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EKS39754.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_29
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31252..32043)
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QNI2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07397.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
lytic murein transglycosylase
|
|
SCNpilot_expt_1000_bf_scaffold_1248_curated_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32514..34226)
|
peptidase M23 n=1 Tax=Afipia birgiae RepID=UPI0003667A8C
Uncharacterized protein {ECO:0000313|EMBL:EKS39756.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
peptidase M23B
|