name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1639_curated_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..440
|
Cell division protein FtsK n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHD1_9BRAD
DNA translocase ftsK {ECO:0000313|EMBL:EKS33934.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
576..1361
|
membrane protein n=1 Tax=Afipia birgiae RepID=UPI00031C556C
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
outer membrane lipoprotein carrier protein LolA
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1457..2272
|
Exodeoxyribonuclease III {ECO:0000313|EMBL:EGP09418.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EGP09418.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Exodeoxyribonuclease III n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHC9_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2396..2836)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4T7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34675.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cyclic nucleotide-binding domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2958..3644)
|
DNA-binding response regulator n=2 Tax=Bradyrhizobiaceae RepID=F7QHC7_9BRAD
DNA-binding response regulator {ECO:0000313|EMBL:EGP09416.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
two-component response regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3775..4344
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWG6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34677.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4479..5168)
|
YggS family pyridoxal phosphate enzyme n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8I3_9BRAD
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EKS34678.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K06997
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5278..6969
|
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1T7_9BRAD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS34679.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cph; phytochrome-like protein Cph
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7132..9750
|
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
leucyl-tRNA synthetase n=1 Tax=Afipia birgiae RepID=UPI000303F9B7
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9737..10291
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZR8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34681.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K03643 LPS-assembly lipoprotein
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10316..11344
|
holA; DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWH5_9BRAD
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EKS34682.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11495..12385)
|
ParB-like partition protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8J2_9BRAD
ParB-like partition protein {ECO:0000313|EMBL:EKS34683.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ParB family protein; K03497 chromosome partitioning protein, ParB family
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12569..13102)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1U4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34684.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
parA; chromosome partitioning protein ParA; K03496 chromosome partitioning protein
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14094..15965)
|
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Afipia birgiae RepID=UPI00036CCEB6
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_15
unknown
|
Not on your lists |
comp(15949..16110)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16135..17484)
|
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
tRNA modification GTPase; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHB6_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17585..18286)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8J8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34688.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
GNAT family acetyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18460..19725)
|
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Transcription termination factor Rho n=2 Tax=Bradyrhizobiaceae RepID=F7QHB5_9BRAD
rho; transcription termination factor Rho; K03628 transcription termination factor Rho
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20007..20429)
|
TIGR00701 family protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4V3_9BRAD
TIGR00701 family protein {ECO:0000313|EMBL:EKS34690.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K08973 putative membrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20994..21809
|
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
PEP synthetase regulatory protein n=1 Tax=Afipia birgiae RepID=UPI000300CC56
hypothetical protein; K09773 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21806..22414
|
Maf-like protein HMPREF9695_04602 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWI7_9BRAD
Maf-like protein HMPREF9695_04602 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Maf-like protein; K06287 septum formation protein
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22429..23040
|
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Dephospho-CoA kinase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZK4_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23178..23876
|
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III, epsilon subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1V5_9BRAD
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EKS34694.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23907..24386)
|
Protein-export protein SecB n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4V8_9BRAD
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_25
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24775..25473
|
calcium-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002EA99AE
Transporter {ECO:0000313|EMBL:EGP09396.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_26
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25391..26863)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SQK6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD96483.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27044..28675)
|
ATP-dependent protease ATPase subunit HslU n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHA4_9BRAD
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28715..29320)
|
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002ED7931
UPF0314 protein HMPREF9695_04610 {ECO:0000256|HAMAP-Rule:MF_01514}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29317..29868)
|
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
ATP-dependent protease subunit HslV n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZU7_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1639_curated_30
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30075..30668
|
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2H6_9BRAD
|