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SCNpilot_expt_1000_bf_scaffold_8778_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8778_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..353)
DNA (351bp) protein (117aa)
dacC; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNF5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39888.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_8778_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1266..1394
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGJ7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39889.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
alpha/beta hydrolase fold protein
SCNpilot_expt_1000_bf_scaffold_8778_curated_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1400..1645)
DNA (246bp) protein (82aa)
Rare lipoprotein A n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGN3_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48332.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
rare lipoprotein A; K03642 rare lipoprotein A
SCNpilot_expt_1000_bf_scaffold_8778_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1632..2297)
DNA (666bp) protein (222aa)
Rare lipoprotein A n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK42_9BRAD
Rare lipoprotein A {ECO:0000313|EMBL:EKS39890.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K03642 rare lipoprotein A
SCNpilot_expt_1000_bf_scaffold_8778_curated_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2542..3750)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR44_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28678.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8778_curated_6
unknown

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4556..4666
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8778_curated_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4918..5217)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQU6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:CEG09862.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
histone family protein DNA-binding protein
SCNpilot_expt_1000_bf_scaffold_8778_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5367..5771)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEB4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39891.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
conserved membrane hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8778_curated_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5934..6152
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00035ED56B
Uncharacterized protein {ECO:0000313|EMBL:EKS39917.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8778_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6664..6930
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNG0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39893.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8778_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7300..7458
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000302D21A
Uncharacterized protein {ECO:0000313|EMBL:EKS39895.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_8778_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7519..8010)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEB9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39896.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8778_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8131..9030)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBA8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39897.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8778_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9027..9671)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNG2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39898.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cyclic nucleotide-binding domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8778_curated_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9833..10663)
DNA (831bp) protein (277aa)
Metal-dependent beta-lactamase superfamily hydrolase n=2 Tax=Bradyrhizobiaceae RepID=F7QMY0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39908.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
metal-dependent hydrolase
SCNpilot_expt_1000_bf_scaffold_8778_curated_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10802..10963)
DNA (162bp) protein (54aa)
adenylate/guanylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1]
adenylate cyclase n=1 Tax=Afipia birgiae RepID=UPI000376C5A7
Uncharacterized protein {ECO:0000313|EMBL:EKS39907.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Displaying 16 items

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