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SCNpilot_expt_1000_bf_scaffold_3244_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3244_curated_1
unknown

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comp(97..207)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3244_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(620..2035)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P246_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34764.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
major facilitator transporter; K06902 MFS transporter, UMF1 family
SCNpilot_expt_1000_bf_scaffold_3244_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2153..3904
DNA (1752bp) protein (584aa)
gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8V4_9BRAD
Gamma-glutamyltransferase {ECO:0000313|EMBL:EKS34763.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_3244_curated_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4034..5323
DNA (1290bp) protein (430aa)
Sialic acid transporter NanT n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHF2_9BRAD
Sialic acid transporter NanT {ECO:0000313|EMBL:EGP09441.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3244_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5316..6215
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P025_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34761.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
amidohydrolase 2; K07046
SCNpilot_expt_1000_bf_scaffold_3244_curated_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6335..7000)
DNA (666bp) protein (222aa)
glutathione S-transferase III (GST-III) (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NUE9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33952.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_3244_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7153..7743
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P241_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34759.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K09965 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3244_curated_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8017..9210
DNA (1194bp) protein (398aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHE8_9BRAD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EGP09437.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
branched chain amino acid ABC transporter substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_3244_curated_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9277..10014
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZN3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33949.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
short chain dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_3244_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10124..11053
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
2-dehydropantoate 2-reductase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P536_9BRAD
SCNpilot_expt_1000_bf_scaffold_3244_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11125..12180)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031CA6DF
Uncharacterized protein {ECO:0000313|EMBL:EKS34754.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
alpha/beta hydrolase fold protein
SCNpilot_expt_1000_bf_scaffold_3244_curated_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12847..13761
DNA (915bp) protein (305aa)
thioredoxin n=1 Tax=Afipia birgiae RepID=UPI00031C8994
Thioredoxin {ECO:0000313|EMBL:EKS33946.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
thioredoxin; K05838 putative thioredoxin
SCNpilot_expt_1000_bf_scaffold_3244_curated_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13789..14112
DNA (324bp) protein (108aa)
ATP-dependent protease n=1 Tax=Afipia birgiae RepID=UPI0002DD8D55
Uncharacterized protein {ECO:0000313|EMBL:EKS33945.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
peptidase S16, lon-like; K07157
Displaying 13 items

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