name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_696_curated_31
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27139..28029)
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0F2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31918.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative 6-phosphogluconate dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_32
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28056..28766)
|
GntR family transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000348179E
Uncharacterized protein {ECO:0000313|EMBL:ESY64065.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_33
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28879..30102
|
ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003494CB0
Receptor family ligand binding region family protein 28 {ECO:0000313|EMBL:EHK65551.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
receptor family ligand binding region family protein 28
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_34
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30124..30984
|
ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034D81D4
Inner-membrane translocator {ECO:0000313|EMBL:EHK65552.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_35
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30981..31952
|
ABC transporter permease n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003144C59
ABC transporter permease {ECO:0000313|EMBL:KGY28011.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_36
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31949..32674
|
ABC transporter (EC:3.6.3.-); K01995 branched-chain amino acid transport system ATP-binding protein
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002F2CE73
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KCB41848.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_37
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32671..33390
|
amino acid ABC transporter ATPase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000347EC58
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) {ECO:0000313|EMBL:CCH09831.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-1996.;"
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_38
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33444..33848
|
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EGP08220.1}; EC=4.1.1.44 {ECO:0000313|EMBL:EGP08220.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
4-carboxymuconolactone decarboxylase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QK51_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_39
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33913..34830)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBR9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37065.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_40
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34947..35645
|
pirin n=1 Tax=Afipia birgiae RepID=UPI0002D29123
Pirin-like protein {ECO:0000313|EMBL:EKS37066.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Pirin-like protein; K06911
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_41
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35702..36301
|
NAD(P)H dehydrogenase (quinone) {ECO:0000255|HAMAP-Rule:MF_01017}; EC=1.6.5.2 {ECO:0000255|HAMAP-Rule:MF_01017};; Flavoprotein WrbA; NAD(P)H:quinone oxidoreductase {ECO:0000255|HAMAP-Rule:MF_01017}; Short=NQO {ECO:0000255|HAMAP-Rule:MF_01017};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
NAD(P)H dehydrogenase (quinone) n=2 Tax=Oligotropha carboxidovorans RepID=NQOR_OLICO
rbh
wrbA; flavoprotein WrbA; K03809 Trp repressor binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_42
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36491..37315
|
alpha/beta hydrolase n=1 Tax=Afipia birgiae RepID=UPI0002EF287F
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47173.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
non-heme haloperoxidase
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_43
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37385..37678)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8E3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37069.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_44
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37749..38123
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P3H3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09980.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_45
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(38197..38394)
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000374C67B
Uncharacterized protein {ECO:0000313|EMBL:EKS35256.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_46
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38409..38882
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NY80_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09984.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_47
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(38953..39165)
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PAA5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35258.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_48
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39420..39782)
|
Two-component response regulator n=3 Tax=Bradyrhizobiaceae RepID=F7QG44_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35259.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
response regulator receiver domain-containing protein; K13589 two-component system, cell cycle response regulator CpdR
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_49
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
40014..40901
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6F6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37076.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
N-formylglutamate amidohydrolase
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_50
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
41452..42234
|
histidinol-phosphate phosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
inositol monophosphatase n=1 Tax=Afipia birgiae RepID=UPI0002F9DBE9
Inositol monophosphatase family protein {ECO:0000313|EMBL:EGP09989.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_51
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(42265..43158)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFA5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37078.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_52
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
43253..44017
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PAB0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35263.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K07090
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_53
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
44042..44461
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG50_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09992.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
peptidyl-tRNA hydrolase domain-containing protein; K15034 ribosome-associated protein
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_54
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
44563..46419
|
DNA mismatch repair protein MutL n=1 Tax=Afipia birgiae RepID=UPI0003043BAD
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_55
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(46427..47479)
|
Nucleotide sugar dehydrogenase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NY87_9BRAD
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EKS35267.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_56
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(47763..48314)
|
RsmD family RNA methyltransferase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PAB4_9BRAD
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EKS35268.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_57
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(48314..48604)
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFA9_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_58
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(48571..50358)
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG55_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_59
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
50528..50974
|
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P6N0_9BRAD
zinc-binding CMP/dCMP deaminase
|
|
SCNpilot_expt_1000_bf_scaffold_696_curated_60
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(50971..51420)
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P1G8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35271.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
acetyltransferase
|