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SCNpilot_expt_1000_bf_scaffold_696_curated

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_696_curated_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..173
DNA (171bp) protein (57aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Afipia birgiae RepID=UPI0002FB5500
Uncharacterized protein {ECO:0000313|EMBL:EKS33461.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
pyridoxamine 5'-phosphate oxidase-related, FMN-binding; K07006
SCNpilot_expt_1000_bf_scaffold_696_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182..397)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NV30_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34177.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_696_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

999..1706
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6Z8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34178.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_696_curated_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1703..2029
DNA (327bp) protein (109aa)
Ferredoxin n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI48_9BRAD
Ferredoxin {ECO:0000313|EMBL:EGP09251.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K06940
SCNpilot_expt_1000_bf_scaffold_696_curated_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2089..2271
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NSY0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09250.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_696_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2296..2697)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYB6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34181.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_696_curated_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2887..3768)
DNA (882bp) protein (294aa)
haloalkane dehalogenase; K01563 haloalkane dehalogenase [EC:3.8.1.5]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NY85_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33454.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_696_curated_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3837..4526)
DNA (690bp) protein (230aa)
Nitroreductase-like protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI43_9BRAD
Nitroreductase-like protein {ECO:0000313|EMBL:EGP09246.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
nitroreductase
SCNpilot_expt_1000_bf_scaffold_696_curated_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4530..5774)
DNA (1245bp) protein (415aa)
acyl-CoA dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI000317D395
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:EGP09245.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Acyl-CoA dehydrogenase-like
SCNpilot_expt_1000_bf_scaffold_696_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5788..6915)
DNA (1128bp) protein (376aa)
acyl-CoA dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI00031AAE0C
Uncharacterized protein {ECO:0000313|EMBL:EKS34186.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
acyl-CoA dehydrogenase-like protein
SCNpilot_expt_1000_bf_scaffold_696_curated_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7061..7663)
DNA (603bp) protein (201aa)
acyl-CoA synthetase; K12508 feruloyl-CoA synthase [EC:6.2.1.34]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P189_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33450.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_696_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7670..8959)
DNA (1290bp) protein (430aa)
acyl-CoA synthetase; K12508 feruloyl-CoA synthase [EC:6.2.1.34]
acyl-CoA synthetase n=1 Tax=Afipia birgiae RepID=UPI00030909D7
Uncharacterized protein {ECO:0000313|EMBL:EKS34187.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_696_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9098..9856)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P713_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34188.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_696_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9901..10443)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0C9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34189.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_expt_1000_bf_scaffold_696_curated_15
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11087..11680)
DNA (594bp) protein (198aa)
Rranscriptional regulator, TetR family n=2 Tax=Bradyrhizobiaceae RepID=F7QI36_9BRAD
Rranscriptional regulator, TetR family {ECO:0000313|EMBL:EGP09239.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
regulatory protein TetR
SCNpilot_expt_1000_bf_scaffold_696_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11894..13066
DNA (1173bp) protein (391aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA C-acetyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYC8_9BRAD
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EKS34191.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_696_curated_17
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13265..13807
DNA (543bp) protein (181aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EGP09237.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EGP09237.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Long-chain-fatty-acid--CoA ligase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI34_9BRAD
SCNpilot_expt_1000_bf_scaffold_696_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13788..14798
DNA (1011bp) protein (337aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
acyl-CoA synthetase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003696628
Uncharacterized protein {ECO:0000313|EMBL:EKS34192.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_696_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14943..15563)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P718_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34193.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_696_curated_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15652..16113)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NSW5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33442.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
leucine-responsive transcriptional regulatory protein
SCNpilot_expt_1000_bf_scaffold_696_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16223..19234
DNA (3012bp) protein (1004aa)
putA; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3E2_9BRAD
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EKS34195.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_696_curated_22
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19362..19859)
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8P180_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09233.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_696_curated_23
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19864..20718)
DNA (855bp) protein (285aa)
Beta-propeller domains-containing protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI29_9BRAD
Beta-propeller domains-containing protein {ECO:0000313|EMBL:EGP09232.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K06872 uncharacterized protein
SCNpilot_expt_1000_bf_scaffold_696_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20741..21415)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P724_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34198.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
signal peptide; K03744 LemA protein
SCNpilot_expt_1000_bf_scaffold_696_curated_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21695..22546
DNA (852bp) protein (284aa)
enoyl-CoA hydratase (EC:4.2.1.17) rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0E3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34199.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_696_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22548..23831)
DNA (1284bp) protein (428aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA C-acetyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3N2_9BRAD
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EKS37167.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_696_curated_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23926..24564)
DNA (639bp) protein (213aa)
GNAT family acetyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002E40F74
Uncharacterized protein {ECO:0000313|EMBL:EKS37168.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_696_curated_28
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24661..24873)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030377ED
Uncharacterized protein {ECO:0000313|EMBL:EGP10085.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_696_curated_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24985..25884
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC28_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37170.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA-binding transcriptional activator GcvA
SCNpilot_expt_1000_bf_scaffold_696_curated_30
Pseudomonas sp. GM48, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25901..27130)
DNA (1230bp) protein (410aa)
hydrolase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A82FB
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJM55010.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;"
hydrolase protein
Displaying items 1-30 of 77 in total

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