ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_1000_bf_scaffold_696_curated_13

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(9098..9856)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P713_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 252.0
  • Bit_score: 432
  • Evalue 3.30e-118
Uncharacterized protein {ECO:0000313|EMBL:EKS34188.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 252.0
  • Bit_score: 432
  • Evalue 4.60e-118
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 252.0
  • Bit_score: 429
  • Evalue 6.70e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCAGCTCAAGGATATTTCAGTACTGGTGACGGGCGGCGGCTCGGGCCTCGGCGCGGCAACGGCGCGCGCGATGGCGGCCAAGGGCGCGAAGGTCGCGGTCATCGACATGAACAAGGACGGTGCCGAGAAGGTCGCCGCCGAGATCAAGGGTCTCGCGCTGGTCGGCGACGTGTCGGAAGAAGCGCCGGTCAAGGATGCCATCGCGAAGGCGGAAGCGGCGCACGGCCCGATCCGCATTCTGGTGAACTGCGCGGGCATCGGTAATGCGGGCAAGACGGTCGGCAAGAATGGCGCATATGTGCTGGCGGATTATACCCGCGTCATCAAGGTCAACCTGATCGGCAGTTTCAACTGTATTCGCCTTGTGGCGGAGCGCATGCAGAATGCGCCGACCATCGGCGAGGAGCGCGGCGTCATCATCAACACCGCGAGCGTCGCCGCCTATGACGGCCAGATCGGGCAGGCGGCCTATTCGTCGTCCAAGGGCGGCATTGTCGGCATGACCCTCCCGGTGGCGCGCGATCTCGCCTCGCTCAACATCCGCGTGATGACCATCGCGCCAGGCCTGTTCCTGACGCCGCTGCTGATGGGCCTGCCGCAGGAAGCGCAGGACAGCCTCGGCAAGCAGGTGCCGCATCCGGCGCGCCTCGGCGATCCGAGCGAGTACGCGGCCCTTGCTGTGCACATCGTCGAGAATCCGATGCTCAACGGCGAAGTTATCCGCCTCGACGGCGCGATCCGCATGGCGCCGCGGTAG
PROTEIN sequence
Length: 253
MQLKDISVLVTGGGSGLGAATARAMAAKGAKVAVIDMNKDGAEKVAAEIKGLALVGDVSEEAPVKDAIAKAEAAHGPIRILVNCAGIGNAGKTVGKNGAYVLADYTRVIKVNLIGSFNCIRLVAERMQNAPTIGEERGVIINTASVAAYDGQIGQAAYSSSKGGIVGMTLPVARDLASLNIRVMTIAPGLFLTPLLMGLPQEAQDSLGKQVPHPARLGDPSEYAALAVHIVENPMLNGEVIRLDGAIRMAPR*