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SCNpilot_expt_1000_bf_scaffold_4609_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4609_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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229..420
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D877D9
Uncharacterized protein {ECO:0000313|EMBL:EKS34259.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_4609_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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495..980
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3M4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34255.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4609_curated_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1153..2442
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Bradyrhizobiaceae RepID=F7QHY9_9BRAD
SCNpilot_expt_1000_bf_scaffold_4609_curated_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2465..2965
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NW56_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33401.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4609_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3090..4385
DNA (1296bp) protein (432aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYJ9_9BRAD
SCNpilot_expt_1000_bf_scaffold_4609_curated_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4382..4891
DNA (510bp) protein (170aa)
UPF0262 protein HMPREF9696_03444 n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4Q1_9BRAD
UPF0262 protein HMPREF9696_03444 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4609_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4921..5376
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0L0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34249.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
low molecular weight phosphotyrosine protein phosphatase
SCNpilot_expt_1000_bf_scaffold_4609_curated_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5489..6112
DNA (624bp) protein (208aa)
Maf-like protein maf n=2 Tax=Bradyrhizobiaceae RepID=F7QHZ4_9BRAD
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
maf; Maf-like protein; K06287 septum formation protein
SCNpilot_expt_1000_bf_scaffold_4609_curated_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6102..6296
DNA (195bp) protein (65aa)
DNA gyrase inhibitor YacG n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NW61_9BRAD
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K09862 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4609_curated_10
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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6760..7425
DNA (666bp) protein (222aa)
TetR family transcriptional regulator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F4W3_9BURK
Putative HTH-type transcriptional regulator TtgW {ECO:0000313|EMBL:EXI85888.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4609_curated_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7441..8256
DNA (816bp) protein (272aa)
Enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036CA91B
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIZ39535.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_expt_1000_bf_scaffold_4609_curated_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8315..9121
DNA (807bp) protein (269aa)
Zn-dependent hydrolase n=1 Tax=Afipia birgiae RepID=UPI00038226B7
Uncharacterized protein {ECO:0000313|EMBL:EKS33408.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4609_curated_13
bacterium YEK0313, Bacteria

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comp(9198..9530)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RR03_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CEJ10400.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein; K09946 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4609_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9633..10136)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P762_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34228.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying 14 items

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