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SCNpilot_expt_1000_bf_scaffold_1771_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1771_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1438
DNA (1437bp) protein (479aa)
Flagellar hook-basal body protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDC9_9BRAD
Flagellar hook-basal body protein {ECO:0000313|EMBL:EKS36328.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE
SCNpilot_expt_1000_bf_scaffold_1771_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1491..3386
DNA (1896bp) protein (632aa)
Flagellar hook-associated protein FlgK n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P168_9BRAD
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:EKS36327.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flgK; flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK
SCNpilot_expt_1000_bf_scaffold_1771_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3394..4905
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4C1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36326.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4995..5429)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9Q7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36325.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flbT; flagellum biosynthesis repressor protein FlbT; K06601 flagellar protein FlbT
SCNpilot_expt_1000_bf_scaffold_1771_curated_5
unknown

Not on your lists

comp(5705..5905)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1771_curated_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6810..7691
DNA (882bp) protein (294aa)
Flagellar hook-associated protein n=2 Tax=Bradyrhizobiaceae RepID=F7QQC0_9BRAD
Flagellar hook-associated protein {ECO:0000313|EMBL:EGP06534.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_7
unknown

Not on your lists

comp(7938..8120)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00035C3E41
SCNpilot_expt_1000_bf_scaffold_1771_curated_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8812..9879
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGI8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27544.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10009..10389
DNA (381bp) protein (127aa)
flagellar biosynthesis repressor FlbT n=1 Tax=Afipia birgiae RepID=UPI0002EFA8B4
Uncharacterized protein {ECO:0000313|EMBL:EKS36322.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flbT; flagellar biosynthesis repressor FlbT; K06601 flagellar protein FlbT
SCNpilot_expt_1000_bf_scaffold_1771_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10393..10758
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4B7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36321.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flaF; flagellar protein FlaF; K06602 flagellar protein FlaF
SCNpilot_expt_1000_bf_scaffold_1771_curated_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10782..11147
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NF23_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27546.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11165..11527)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PE30_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37820.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11703..12104)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003707A2F
Uncharacterized protein {ECO:0000313|EMBL:EKS36318.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12208..12546)
DNA (339bp) protein (113aa)
Flagellar protein n=2 Tax=Bradyrhizobiaceae RepID=F7QQB3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37818.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
chemotactic signal-response protein CheL
SCNpilot_expt_1000_bf_scaffold_1771_curated_15
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12546..13664)
DNA (1119bp) protein (373aa)
Flagellar P-ring protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQB2_9BRAD
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI
SCNpilot_expt_1000_bf_scaffold_1771_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13972..14379
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9Q0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36315.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
fliX; flagellar assembly regulator FliX
SCNpilot_expt_1000_bf_scaffold_1771_curated_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14622..14987
DNA (366bp) protein (122aa)
RNA polymerase-binding transcription factor DksA n=2 Tax=Bradyrhizobiaceae RepID=F7QQB0_9BRAD
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
dksA; DnaK suppressor protein DksA; K06204 DnaK suppressor protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_18
unknown

Not on your lists

comp(15060..15308)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1771_curated_19
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15269..15415)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PHJ7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP06669.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15563..16291
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P5H5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37812.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Crp/Fnr family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1771_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16321..17469)
DNA (1149bp) protein (383aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P155_9BRAD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS36312.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sensory box/GGDEF family protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17809..18558)
DNA (750bp) protein (250aa)
Flagellar L-ring protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6F8_9BRAD
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flgH; flagellar basal body L-ring protein; K02393 flagellar L-ring protein precursor FlgH
SCNpilot_expt_1000_bf_scaffold_1771_curated_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18564..19601)
DNA (1038bp) protein (346aa)
Flagella basal body P-ring formation protein FlgA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDB5_9BRAD
Flagella basal body P-ring formation protein FlgA {ECO:0000313|EMBL:EKS36308.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flgA; flagellar basal body P-ring biosynthesis protein FlgA; K02386 flagella basal body P-ring formation protein FlgA
SCNpilot_expt_1000_bf_scaffold_1771_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19613..20404)
DNA (792bp) protein (264aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P150_9BRAD
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:EKS36307.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flgG; flagellar basal-body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG
SCNpilot_expt_1000_bf_scaffold_1771_curated_25
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20417..21181)
DNA (765bp) protein (255aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQA1_9BRAD
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:EGP06662.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
flgF; flagellar basal-body rod protein FlgF; K02391 flagellar basal-body rod protein FlgF
SCNpilot_expt_1000_bf_scaffold_1771_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21548..22009
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9P1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36305.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
flagellar basal body-associated protein FliL; K02415 flagellar FliL protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_27
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22028..23227
DNA (1200bp) protein (400aa)
flagellar motor switch protein FliM n=1 Tax=Afipia birgiae RepID=UPI00031CCC5F
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
fliM; flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM
SCNpilot_expt_1000_bf_scaffold_1771_curated_28
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23644..24402
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P145_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36302.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24528..28175
DNA (3648bp) protein (1216aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4A0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36301.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1771_curated_30
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28221..28979)
DNA (759bp) protein (253aa)
Flagellar biosynthesis protein FliP n=2 Tax=Bradyrhizobiaceae RepID=F7QQ94_9BRAD
Flagellar biosynthesis protein FliP {ECO:0000313|EMBL:EGP06655.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP
Displaying items 1-30 of 31 in total

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